[R-SIG-Mac]yags package installation?
Steve Buyske
buyske@stat.rutgers.edu
Fri, 24 Jan 2003 14:08:44 -0500
Has anyone successfully installed the yags package under Darwin? When
I install it I get
.
.
.
you will need to have
/sw/lib/R/library/yags/libs
[or the current --library or -l destination]
as an element of LD_LIBRARY_PATH,
or create a version of libu.so (e.g., using yags.make.libu)
and have an LD_LIBRARY_PATH entry superior to that version
====================================
yags.cc: In function `matrix unstrinv(matrix, int, matrix)':
yags.cc:1798: warning: passing `double' for argument 1 of `double
matrix::el(int, int)'
yags.cc:1798: warning: passing `double' for argument 2 of `double
matrix::el(int, int)'
.
.
.
I'm not sure whether those warnings are lethal or not. As recommended
in the note, I type
setenv LD_LIBRARY_PATH /sw/lib/R/library/yags/libs
but then in R I get
> library(yags)
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library "/sw/lib/R/library/yags/libs/yags.so":
dlcompat: dyld: /sw/lib/R/bin/R.bin Undefined symbols:
__Z11alpfun_user6matrixS_S_diS_di
__Z12wcorinv_user6matrixiS_
In addition: Warning message:
The use of _ is deprecated: you will be warned only once per session
Warning messages:
1: ============== in: firstlib(which.lib.loc, package)
2: library.dynam failed, you probably need dir
holding libu.so in LD_LIBRARY_PATH; see the help page
(package load continues to give access to man page, add
$R_LIBS/yags/libs to LD_LIBRARY_PATH
or consider yags.make.libu([yagsInstallRoot]) followed by resetting
LD_LIBRARY_PATH) in: firstlib(which.lib.loc, package)
> version
_
platform powerpc-apple-darwin6.2
arch powerpc
os darwin6.2
system powerpc, darwin6.2
status
major 1
minor 6.1
year 2002
month 11
day 01
language R
Any suggestions appreciated.
Steve Buyske
PS I got the library from
http://www.biostat.harvard.edu/~carey/old_public_html/yags_3.21-3.tar.gz
--
Steve Buyske (rhymes with "nice key") Statistics Dept
phone: 732.445.2690 fax: 732.445.3428 Rutgers University
buyske@stat.rutgers.edu 110 Frelinghuysen Rd.
http://stat.rutgers.edu Piscataway, NJ 08854-8019