[R-sig-hpc] svm for Bioinformatics
Bernd Bischl
bernd_bischl at gmx.net
Fri Jun 15 10:41:17 CEST 2012
Hi Luis,
could you state a bit more specifically what your questiona regarding SVM
performance are?
Also, because you mention bioinformatics apüplications, I assume you work in a
setting where p >> n, and n is often quite small, is that essentially correct?
Bernd
On 13.06.2012 12:45, Luis Cebamanos wrote:
> Hi all,
>
> I am studying the svm function (included in e1071 package) for bioinformatics in
> order to improve its performance. From an R users survey, it was mention as one
> of the functions to improve the performance in bioinformatics.
> After profiling the application, we have not found difficulties running large
> datasets and I was wandering if someone often uses svm and could give us some
> information about its performance.
>
> Best regards,
> Luis
>
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