[R-sig-hpc] Sun Grid Engine (SGE) and Rsge package

Rainer M Krug r.m.krug at gmail.com
Fri Dec 5 07:49:00 CET 2008


Hi

I just found the Rsge package which seems to suit my need to do
parallel processing on a cluster with SGE. I did not manage to use
Rmpi or snow (which would have been nice).

My only problem is, that I can't find any documentation on how to use
Rsge (apart from the one included in the source package) - it seems to
utilise several options which might be useful to set.
Does anybody has any experience with this package or can show me a way
of using snow or Rmpi in an environment where I have to use SGE (qsub
...)?

Thanks

Rainer

-- 
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
Biology, UCT), Dipl. Phys. (Germany)

Centre of Excellence for Invasion Biology
Faculty of Science
Natural Sciences Building
Private Bag X1
University of Stellenbosch
Matieland 7602
South Africa



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