[R-sig-Geo] R crashes when reading geopackage files with st_read (sf package) in macOS

[Roger Bivand]

Further, with R 4.0.4 on Rosetta but with CRAN binary packages, there is no problem. It is most likely that the problem is caused by user-installed upstream software components, and sf or rgdal installed from source, possibly with libsqlite3 also installed from source. Please report back if any other drivers fail - RSQLite does not use local binaries, but bundles the software library itself.

--
Roger Bivand
Norwegian School of Economics
Postboks 3490 Ytre Sandviken, 5045 Bergen, Norway
Roger.Bivand using nhh.no


________________________________________
Fra: R-sig-Geo <r-sig-geo-bounces using r-project.org> på vegne av Roger Bivand <Roger.Bivand using nhh.no>
Sendt: onsdag 31. mars 2021 18.25
Til: Manuel Spínola; r-sig-geo
Emne: Re: [R-sig-Geo]  R crashes when reading geopackage files with st_read (sf package) in macOS

Please refer to the associated sf issue on github: https://github.com/r-spatial/sf/issues/1606 for completeness. Please confirm that you are not using the MacOS sf CRAN binary package, but have installed GDAL, PROJ and GEOS yourself. Please also confirm that you see the same error with every GPKG file.

--
Roger Bivand
Norwegian School of Economics
Postboks 3490 Ytre Sandviken, 5045 Bergen, Norway
Roger.Bivand using nhh.no


________________________________________
Fra: R-sig-Geo <r-sig-geo-bounces using r-project.org> på vegne av Manuel Spínola <mspinola10 using gmail.com>
Sendt: onsdag 31. mars 2021 17.55
Til: r-sig-geo
Emne: [R-sig-Geo] R crashes when reading geopackage files with st_read (sf package) in macOS

Dear list members,

When reading geopackages files with st_read (sf package) RStudio crashes (R
session aborted) in macOS.  Any suggestions to fix this problem?

Should I ask this question to the macOS group (r-sig-mac)?

library(sf)
Linking to GEOS 3.9.0, GDAL 3.2.1, PROJ 7.2.1


library(spData)


world = st_read(system.file("shapes/world.gpkg", package = "spData"))




--
*Manuel Spínola, Ph.D.*
Instituto Internacional en Conservación y Manejo de Vida Silvestre
Universidad Nacional
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Heredia
COSTA RICA
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mspinola10 using gmail.com
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Personal website: Lobito de río <https://sites.google.com/site/lobitoderio/>
Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/>

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