[R-sig-Geo] Segmentation fault

[Eduardo Diez]

Hi everyone.
I'm having problems running spatial processes in a domino machine. I
created a new environment with updated spatial packages but I'm unable to
run simple tasks. Below an example and some information:

> library(sf)Linking to GEOS 3.6.2, GDAL 2.4.2, PROJ 4.9.3> sessionInfo()
R version 3.6.1 (2019-07-05)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.3 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/atlas/libblas.so.3.10.3
LAPACK: /usr/lib/x86_64-linux-gnu/atlas/liblapack.so.3.10.3

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] sf_0.8-0

loaded via a namespace (and not attached):
 [1] compiler_3.6.1     magrittr_1.5       class_7.3-15       tools_3.6.1
 [5] DBI_1.0.0          units_0.6-5        Rcpp_1.0.2         KernSmooth_2.23-16
 [9] grid_3.6.1         e1071_1.7-2        classInt_0.4-2
> sf_extSoftVersion()
          GEOS           GDAL         proj.4 GDAL_with_GEOS     USE_PROJ_H
       "3.6.2"        "2.4.2"        "4.9.3"         "true"        "false"
> nc = st_read(system.file("shape/nc.shp", package="sf"))
Reading layer `nc' from data source
`/usr/local/lib/R/site-library/sf/shape/nc.shp' using driver `ESRI
Shapefile'
Simple feature collection with 100 features and 14 fields
geometry type:  MULTIPOLYGON
dimension:      XY
bbox:           xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965
epsg (SRID):    4267
proj4string:    +proj=longlat +datum=NAD27 +no_defs
> asd <- st_area(nc[1,]) # area from long/lat


*** caught segfault ***
address (nil), cause 'unknown'
Traceback:
 1: CPL_crs_parameters(x$proj4string)
 2: structure(CPL_crs_parameters(x$proj4string), names =
c("SemiMajor",     "SemiMinor", "InvFlattening", "units_gdal",
"IsVertical",     "WktPretty", "Wkt"))
 3: crs_parameters(crs) 4: st_crs.sfc(st_geometry(x), parameters = TRUE)
 5: st_crs(st_geometry(x), parameters = TRUE)
 6: lwgeom::st_geod_area(x)
 7: st_area.sfc(st_geometry(x, ...))
 8: st_area(st_geometry(x, ...))
 9: st_area.sf(nc[1, ])
10: st_area(nc[1, ])
An irrecoverable exception occurred. R is aborting now ...Segmentation
fault (core dumped)


Thanks in advance

Best,

Edu

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