[R-sig-Geo] is this a clash between wrong version of rgdal and sp?

Tue Oct 20 14:27:20 CEST 2015

Hi Thierry

Yes, our sys-admin will do that when we get a new cluster later this year. I don’t want to burden our very busy admin with support on a cluster that is going to be shut down in a few months.

Yours sincerely / Med venlig hilsen

Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling

Technology & Service Solutions
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From: Thierry Onkelinx [mailto:thierry.onkelinx at inbo.be]
Sent: 20. oktober 2015 13:50
To: Frede Aakmann Tøgersen
Cc: Edzer Pebesma; r-sig-geo at r-project.org
Subject: Re: [R-sig-Geo] is this a clash between wrong version of rgdal and sp?

Dear Frede,

Why not installing INLA on a recent R version? I'm running INLA on R 3.2.2.

Best regards,

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

To call in the statistician after the experiment is done may be no more than asking him to perform a post-mortem examination: he may be able to say what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not ensure that a reasonable answer can be extracted from a given body of data. ~ John Tukey

2015-10-20 12:43 GMT+02:00 Frede Aakmann Tøgersen <frtog at vestas.com<mailto:frtog at vestas.com>>:
Thanks Edzer

So since rgdal depends on sp I first found and installed the most recent versio of sp available for R-2.14.0. Here is a snip from the DESCRIPTION file:

Packaged: 2013-03-29 10:01:36 UTC; rsb
Author: Edzer Pebesma [aut, cre], Roger Bivand [aut], Barry Rowlingson
        [ctb], Virgilio Gomez-Rubio [ctb]
Maintainer: Edzer Pebesma <edzer.pebesma at uni-muenster.de<mailto:edzer.pebesma at uni-muenster.de>>
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-03-29 13:10:06
Package: sp
Version: 1.0-9
Date: 2013-03-30
Title: classes and methods for spatial data
Authors at R: c(person("Edzer", "Pebesma", role = c("aut", "cre"), email =
        "edzer.pebesma at uni-muenster.de<mailto:edzer.pebesma at uni-muenster.de>"), person("Roger", "Bivand",
        role = "aut", email = "Roger.Bivand at nhh.no<mailto:Roger.Bivand at nhh.no>"), person("Barry",
        "Rowlingson", role = "ctb"), person("Virgilio", "Gomez-Rubio",
        role = "ctb"))
Depends: R (>= 2.14.0)
Suggests: lattice, RColorBrewer, rgdal (>= 0.8-7), rgeos (>= 0.1-8)
Imports: methods, graphics, utils, lattice, grid

The sp versio is 1.0-9 and it suggests rgdal (>= 0.8-7).

Installing these versions of sp and rgdal things work for me in R-2.14.0

Yours sincerely / Med venlig hilsen

Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling

Technology & Service Solutions
T +45 9730 5135
M +45 2547 6050
frtog at vestas.com<mailto:frtog at vestas.com>
http://www.vestas.com

Company reg. name: Vestas Wind Systems A/S
This e-mail is subject to our e-mail disclaimer statement.
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-----Original Message-----
From: R-sig-Geo [mailto:r-sig-geo-bounces at r-project.org<mailto:r-sig-geo-bounces at r-project.org>] On Behalf Of Edzer Pebesma
Sent: 20. oktober 2015 11:23
To: r-sig-geo at r-project.org<mailto:r-sig-geo at r-project.org>
Subject: Re: [R-sig-Geo] is this a clash between wrong version of rgdal and sp?

On 20/10/15 11:16, Frede Aakmann Tøgersen wrote:
> Hi
>
> I need to use R-2.14.0 for some INLA calculation. Even though we have more recent versions of R I cannot use those because INLA is not installed for those versions.
>
> When trying to set a CRS I encounter the following error message:
>
> CRS("+proj=utm +zone=34 +datum=WGS84") :   could not find function "checkCRSArgs"
>
> A similar error was seen in
>
> https://stat.ethz.ch/pipermail/r-sig-geo/2013-February/017582.html
>
> A solution was found by Olga but it does not work for me.
>
> So can someone please tell me which version of sp and rgdal can I use for R-2.14.0??

How about using those that were current at the time of release of
2.14.0, or of the release of the INLA version you are bound to?

>
> I have tried several combinations but nothing has helped me so far.
>
> Any help is appreciated.
>
> Yours sincerely / Med venlig hilsen
>
> Frede Aakmann Tøgersen
> Specialist, M.Sc., Ph.D.
> Plant Performance & Modeling
>
> Technology & Service Solutions
> T +45 9730 5135<tel:%2B45%209730%205135>
> M +45 2547 6050<tel:%2B45%202547%206050>
> frtog at vestas.com<mailto:frtog at vestas.com>
> http://www.vestas.com
>
> Company reg. name: Vestas Wind Systems A/S
> This e-mail is subject to our e-mail disclaimer statement.
> Please refer to www.vestas.com/legal/notice<http://www.vestas.com/legal/notice>
> If you have received this e-mail in error please contact the sender.
>
> _______________________________________________
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>

--
Edzer Pebesma
Institute for Geoinformatics (ifgi),  University of Münster,
Heisenbergstraße 2, 48149 Münster, Germany; +49 251 83 33081<tel:%2B49%20251%2083%2033081>
Journal of Statistical Software:   http://www.jstatsoft.org/
Computers & Geosciences:   http://elsevier.com/locate/cageo/
Spatial Statistics Society http://www.spatialstatistics.info

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