[R-sig-Geo] is this a clash between wrong version of rgdal and sp?

Thierry Onkelinx thierry.onkelinx at inbo.be
Tue Oct 20 13:50:14 CEST 2015


Dear Frede,

Why not installing INLA on a recent R version? I'm running INLA on R 3.2.2.

Best regards,

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

To call in the statistician after the experiment is done may be no more
than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not
ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey

2015-10-20 12:43 GMT+02:00 Frede Aakmann Tøgersen <frtog at vestas.com>:

> Thanks Edzer
>
> So since rgdal depends on sp I first found and installed the most recent
> versio of sp available for R-2.14.0. Here is a snip from the DESCRIPTION
> file:
>
> Packaged: 2013-03-29 10:01:36 UTC; rsb
> Author: Edzer Pebesma [aut, cre], Roger Bivand [aut], Barry Rowlingson
>         [ctb], Virgilio Gomez-Rubio [ctb]
> Maintainer: Edzer Pebesma <edzer.pebesma at uni-muenster.de>
> NeedsCompilation: yes
> Repository: CRAN
> Date/Publication: 2013-03-29 13:10:06
> Package: sp
> Version: 1.0-9
> Date: 2013-03-30
> Title: classes and methods for spatial data
> Authors at R: c(person("Edzer", "Pebesma", role = c("aut", "cre"), email =
>         "edzer.pebesma at uni-muenster.de"), person("Roger", "Bivand",
>         role = "aut", email = "Roger.Bivand at nhh.no"), person("Barry",
>         "Rowlingson", role = "ctb"), person("Virgilio", "Gomez-Rubio",
>         role = "ctb"))
> Depends: R (>= 2.14.0)
> Suggests: lattice, RColorBrewer, rgdal (>= 0.8-7), rgeos (>= 0.1-8)
> Imports: methods, graphics, utils, lattice, grid
>
> The sp versio is 1.0-9 and it suggests rgdal (>= 0.8-7).
>
> Installing these versions of sp and rgdal things work for me in R-2.14.0
>
>
> Yours sincerely / Med venlig hilsen
>
> Frede Aakmann Tøgersen
> Specialist, M.Sc., Ph.D.
> Plant Performance & Modeling
>
> Technology & Service Solutions
> T +45 9730 5135
> M +45 2547 6050
> frtog at vestas.com
> http://www.vestas.com
>
> Company reg. name: Vestas Wind Systems A/S
> This e-mail is subject to our e-mail disclaimer statement.
> Please refer to www.vestas.com/legal/notice
> If you have received this e-mail in error please contact the sender.
>
>
>
> -----Original Message-----
> From: R-sig-Geo [mailto:r-sig-geo-bounces at r-project.org] On Behalf Of
> Edzer Pebesma
> Sent: 20. oktober 2015 11:23
> To: r-sig-geo at r-project.org
> Subject: Re: [R-sig-Geo] is this a clash between wrong version of rgdal
> and sp?
>
>
>
> On 20/10/15 11:16, Frede Aakmann Tøgersen wrote:
> > Hi
> >
> > I need to use R-2.14.0 for some INLA calculation. Even though we have
> more recent versions of R I cannot use those because INLA is not installed
> for those versions.
> >
> > When trying to set a CRS I encounter the following error message:
> >
> > CRS("+proj=utm +zone=34 +datum=WGS84") :   could not find function
> "checkCRSArgs"
> >
> > A similar error was seen in
> >
> > https://stat.ethz.ch/pipermail/r-sig-geo/2013-February/017582.html
> >
> > A solution was found by Olga but it does not work for me.
> >
> > So can someone please tell me which version of sp and rgdal can I use
> for R-2.14.0??
>
> How about using those that were current at the time of release of
> 2.14.0, or of the release of the INLA version you are bound to?
>
> >
> > I have tried several combinations but nothing has helped me so far.
> >
> > Any help is appreciated.
> >
> > Yours sincerely / Med venlig hilsen
> >
> > Frede Aakmann Tøgersen
> > Specialist, M.Sc., Ph.D.
> > Plant Performance & Modeling
> >
> > Technology & Service Solutions
> > T +45 9730 5135
> > M +45 2547 6050
> > frtog at vestas.com
> > http://www.vestas.com
> >
> > Company reg. name: Vestas Wind Systems A/S
> > This e-mail is subject to our e-mail disclaimer statement.
> > Please refer to www.vestas.com/legal/notice
> > If you have received this e-mail in error please contact the sender.
> >
> > _______________________________________________
> > R-sig-Geo mailing list
> > R-sig-Geo at r-project.org
> > https://stat.ethz.ch/mailman/listinfo/r-sig-geo
> >
>
> --
> Edzer Pebesma
> Institute for Geoinformatics (ifgi),  University of Münster,
> Heisenbergstraße 2, 48149 Münster, Germany; +49 251 83 33081
> Journal of Statistical Software:   http://www.jstatsoft.org/
> Computers & Geosciences:   http://elsevier.com/locate/cageo/
> Spatial Statistics Society http://www.spatialstatistics.info
>
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