[R-sig-Geo] colocated cokriging with empty neighbourhood causes crash

Edzer Pebesma edzer.pebesma at uni-muenster.de
Sun Jun 26 21:54:47 CEST 2011


Well spotted! I submitted an updated gstat version (0.9-82) that fixes
this bug to CRAN.

Best regards,

On 06/24/2011 05:24 PM, Tom Gottfried wrote:
> Dear list,
> 
> while doing local colocated cokriging it seems that, if some points to
> be predicted have no value of the primary variable in the neighbourhood,
> this causes R to crash with the messages shown below (script with
> modified code from ASDAR book to generate the crash attached).
> Should it be expected that NA is predicted at the respective points (as
> I understood, this is what ordinary kriging and cokriging do when the
> neighbourhood is empty)?
> 
> regards,
> Tom
> 
> Output at crash-time:
> 
> Intrinsic Correlation found. Good.
> [using ordinary cokriging]
> 
>  *** caught segfault ***
> address 0x50, cause 'memory not mapped'
> 
> Traceback:
>  1: .Call("gstat_predict", as.integer(nrow(as.matrix(new.X))),
> as.double(as.vector(raw$locations)),     as.vector(new.X),
> as.integer(block.cols), as.vector(block),     as.vector(bl_weights),
> as.integer(nsim), as.integer(BLUE))
>  2: predict.gstat(g.cc, meuse.grid)
>  3: predict(g.cc, meuse.grid)
> 
> Possible actions:
> 1: abort (with core dump, if enabled)
> 2: normal R exit
> 3: exit R without saving workspace
> 4: exit R saving workspace
> Selection:
> 
> 
> 
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> R-sig-Geo at r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-geo

-- 
Edzer Pebesma
Institute for Geoinformatics (ifgi), University of Münster
Weseler Straße 253, 48151 Münster, Germany. Phone: +49 251
8333081, Fax: +49 251 8339763  http://ifgi.uni-muenster.de
http://www.52north.org/geostatistics      e.pebesma at wwu.de



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