[R-sig-Geo] dismo library: species distribution modelling and obtaining thresholds values
Alastair Potts
potts.a at gmail.com
Thu Jun 23 19:52:58 CEST 2011
Good day all,
I am using the dismo library for species distribution modelling using a
number of models. I would like to select different threshold levels. The
sdm.pdf vignette only gives an example to obtain the Maximum training
(or testing) sensitivity plus specificity threshold:
e at t[which.max(e at TPR + e at TNR)]
I was wondering how one would go about obtaining the following
thresholds from a ModelEvaluation object:
Equal training sensitivity and specificity
Balance training omission, predicted area and threshold value
Equate entropy of thresholded and original distributions
Thanks in advance for your time,
Cheers,
Alastair Potts
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