[R-sig-Geo] error using predict.sarlm
Roger Bivand
Roger.Bivand at nhh.no
Fri Apr 24 18:52:26 CEST 2009
On Fri, 24 Apr 2009, evans324 at umn.edu wrote:
> Hi Roger,
>
>> Then the dak_test_data is a SpatialPolygonsDataFrame, for which there is no
>> nrow() method, leading to problems. Please get around this by saying
>> newdata=as(dak_test_data, "data.frame") to coerce it to data frame. I'll
>> look at providing dim methods for Spatial*DataFrame objects other than
>> SpatialPointsDataFrame, which are in sp already; nrow() just returns
>> dim()[1] of the object.
>
> Thanks for your help so far. I tried your suggestion using the following
> code:
>
> dak_test_vars.10nn.predict <- predict.sarlm(reg_vars_formula.lag,
> newdata=as(dak_test_vars, "data.frame"), listw =
> dak_test.10nn.listw,zero.policy=TRUE)
>
> Now I get a new error message: "Error in invIrW(listw, object$rho) %*% trend
> : non-conformable arguments". I double checked the listw object and data
> frame properties. They are as follows:
>
> nrow(as(dak_test_vars, "data.frame") = 2255
> length(dak_test.10nn.listw)
> [1] 3
> names(dak_test.10nn.listw)
> [1] "style" "neighbours" "weights" length(dak_test.10nn.listw[[2]])
> [1] 2255
> length(coords_test)
> [1] 4510
The lengths are OK now - the final one is just 2*2255, so the length of
all the elements in a two-column matrix.
The problem is occurring in multiplying (I - rho W)^{-1} by the product of
the newdata X values and the fitted regression coefficients - and suggests
that something else is going wrong earlier. If you know how to run
debug(), then do debug(predict.sarlm) and step through, checking the
dimensions and values of B and X used to create trend. If this sounds
scary, do:
save(reg_vars_formula.lag, dak_test_vars, dak_test.10nn.listw,
file="predict_problem.RData")
and attach the saved file to me offlist, and I'll try to see what is going
on.
Roger
>
> I am unsure of how to interpret this error. Do you have any advice? Thanks
> for your help.
>
> Heather
>
>
>
>
>
--
Roger Bivand
Economic Geography Section, Department of Economics, Norwegian School of
Economics and Business Administration, Helleveien 30, N-5045 Bergen,
Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43
e-mail: Roger.Bivand at nhh.no
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