[R-sig-Geo] Failure to install spgrass6

Scott W Mitchell smitch at connect.carleton.ca
Sun Sep 10 15:53:39 CEST 2006


Did you try adding type="source" to the install.packages command?  I  
don't know why not having it would lead to a segfault, but I still  
would have thought you'd need it to avoid it trying to find a binary  
package for the Mac (at least, that's my experience on my G5).

On 10 Sep 2006, at 0:40, Jonathan Greenberg wrote:

> I'm getting this error while trying to install spgrass6 on a dual  
> G5/2ghz w
> 4gb ram, and macos x 10.4.7:
>
>> rS <- "http://r-spatial.sourceforge.net/R"
>> install.packages("spgrass6", repos=rS, dependencies=TRUE)
>
>  *** caught segfault ***
> address 0x5f4d4550, cause 'memory not mapped'
>
> Traceback:
>  1: download.file(url = paste(repos, "PACKAGES.gz", sep = "/"),  
> destfile =
> tmpf,     method = method, cacheOK = FALSE, quiet = TRUE, mode = "wb")
>  2: try(download.file(url = paste(repos, "PACKAGES.gz", sep = "/"),
> destfile = tmpf, method = method, cacheOK = FALSE, quiet =  
> TRUE,     mode =
> "wb"), silent = TRUE)
>  3: available.packages(contriburl = contriburl, method = method)
>  4: .install.macbinary(pkgs = pkgs, lib = lib, contriburl =  
> contriburl,
> method = method, available = available, destdir = destdir,
> installWithVers = installWithVers, dependencies = dependencies)
>  5: install.packages("spgrass6", repos = rS, dependencies = TRUE)
>
> Possible actions:
> 1: abort (with core dump)
> 2: normal R exit
> 3: exit R without saving workspace
> 4: exit R saving workspace
> Selection:
>
> ***
>
> The dependencies have installed correctly, as far as I know.  Any  
> thoughts?
> Is this an issue with the fact that the machine is 64 bit?  I tried
> installing this with the 64 bit version of R and couldn't get rgdal
> installed...
>
> --j
>
> -- 
> Jonathan A. Greenberg, PhD
> NRC Research Associate
> NASA Ames Research Center
> MS 242-4
> Moffett Field, CA 94035-1000
> Office: 650-604-5896
> Cell: 415-794-5043
> AIM: jgrn307
> MSN: jgrn307 at hotmail.com
>
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