[R-sig-genetics] Landscape genetic data analysis using R (LNDG03)

[Oliver Hooker]

Landscape genetic data analysis using R (LNDG03)

We still have a few places left on the above course!!

https://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-lndg03/

This course will be delivered by Prof. Rodney Dyer from the 25th - 29th
March in Glasgow City Centre.

Course Overview:
The term ‘landscape genetics’ has been applied studies that integrate
ecological context and intervening landscape into population genetic
analyses of contemporary processes such as gene flow and migration.  This
course will cover the basics of both quantitative landscape ecology and
population genetics, focusing on how we develop and evaluate
spatial/genetic analyses using the R platform.Students are highly
encouraged to bring their own data to the course.

Monday 25th – Classes from 09:30 to 17:30

Module 1: Spatial & Ecological Data.
Installation & configuring R & RStudio
Acquiring spatial data, projections, and visualization
Vector and raster data

Tuesday 26th – Classes from 09:30 to 17:30

Module 2: Genetic markers and basic analyses
Genetic markers and sampling
Genetic distance, diversity, and structure
Ordination techniques based upon genetic markers

Wednesday 27th – Classes from 09:30 to 17:30

Module 3: Integrating spatial and genetic data
Barrier detection & population division
Resistance Modeling
Mantel and distance regressions
Remote sensing – LiDAR and Hyperspectral data

Thursday 28th – Classes from 09:30 to 17:30

Module 4: Integrating spatial and genetic data
Spatial autocorrelation
Network Approaches
PCMN & Redundancy

Friday 29th – Classes from 09:30 to 16:00

Module 5: Adaptive Genetic Variance
Outliers & gradients
Quantitative genetics, why we should care.
Chromosome walkingCheck out our sister sites,
www.PRstatistics.com (Ecology and Life Sciences)
www.PRinformatics.com (Bioinformatics and data science)
www.PSstatistics.com (Behaviour and cognition)


1. March 25th – 29th 2019
LANDSCAPE GENETIC DATA ANALYSIS USING R (LNDG03)
Glasgow, Scotland, Prof. Rodney Dyer
http://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-lndg03/

2. April 1st – 5th 2019
INTRODUCTION TO STATISTICAL MODELLING FOR PSYCHOLOGISTS USING R (IPSY01)
Glasgow, Scotland, Dr. Dale Barr, Dr Luc Bussierre
http://www.psstatistics.com/course/introduction-to-statistics-using-r-for-psychologists-ipsy02/

3. April 1st – 5th 2019
INDIVIDUAL BASED MODELS FOR ECOLOGSITS (IBME01)
Glasgow, Scotland, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/individual-based-models-using-r-and-netlogo-ibms01/

4. April 8th – 12th 2019
MACHINE LEARNING (MLUR01)
Glasgow, Scotland, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/machine-learning-using-r-mlur01/

5. April 15th – 19th 2019
INTRODUCTION TO PYTHON FOR BIOLOGISTS (IPYB06)
Athens, GREECE,, Dr. Martin Jones
http://www.prinformatics.com/course/introduction-to-python-for-biologists-ipyb07/

6. April 22nd – 26th 2019
GIS USING R (GISR)
Glasgow, Scotland, Dr Luca Nelli
https://www.prstatistics.com/course/gis-using-r-gisr01/

7. April 29th – May 3rd 2019
Multivariate analysis of ecological communities in R with the VEGAN package
(VGNR02)
Orford Musique, Quebec, Canada, Dr. Guillaume Blanchet
https://www.prstatistics.com/course/multivariate-analysis-of-ecological-communities-in-r-with-the-vegan-package-vgnr02/

8. May 6th – 10th 2019
AN EXPLORATION OF R FOR PSYCHOLOGISTS: FROM DATA HANDLING TO MULTILEVEL
MODELLING (XPLR01)
Myuna Bay, AUSTRALIA, Dr. Sean Murphy
https://www.psstatistics.com/course/an-exploration-of-r-for-psychologists-from-data-handling-to-multilevel-modelling-xplr01/

9. May 16th – 19th 2019 (please note this a 4-day course from Thursday to
Monday)
INTRODUCTION TO R FOR EVERYONE (IRFE02)
Myuna Bay, AUSTRALIA, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-anyone-irfe02/

10. May 20th – 24th 2019
MODEL BASE MULTIVARIATE ANALYSIS OF ABUNDANCE DATA USING R (MBMV03)
Myuna Bay, AUSTRALIA, Prof. David Warton
https://www.prstatistics.com/course/model-based-multivariate-analysis-of-abundance-data-using-r-mbmv03/

11. May 21st – 24th 2019
STATISTICAL TOOLKIT FOR ECOLOGISTS (STKE01)
Myuna Bay, AUSTRALIA, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/statistical-toolkit-for-ecologists-stke01/

12. June 10th – 14th 2019
STABLE ISOTOPE MIXING MODELS USING SIAR, SIBER AND MIXSIAR (SIMM04)
Glasgow, Scotland, Dr. Andrew Parnell, Dr. Andrew Jackson
www.prstatistics.com/course/stable-isotope-mixing-models-using-r-simm04/

13. June 17th – 21st 2019
SPATIAL MODELLING AND ANALYSIS OF ADAPTIVE GENOMIC VARIATION (SPGN01)
Glasgow, Dr. Matt Fitzpatrick
https://www.prstatistics.com/course/spatial-modelling-and-analysis-of-adaptive-genomic-variation-spgn01/

14. June 17th – 21st 2019
INTRODUCTION TO PYTHON FOR BIOLOGISTS (IPYB06)
Glasgow, Scotland, Dr. Martin Jones
http://www.prinformatics.com/course/introduction-to-python-for-biologists-ipyb06/

15. June 24th – 28th 2019
ADVANCED PYTHON FOR BIOLOGISTS (APYB03)
Glasgow, Scotland, Dr. Martin Jones
www.prinformatics.com/course/advanced-python-biologists-apyb03/

16. July 1st – 5th 2019
BIOACOUSTICS FOR ECOLOGISTS: HARDWARE, SURVEY DESIGN AND DATA ANALYSIS
(BIAC01)
Glasgow, Scotland, Dr. Paul Howden-Leach
https://www.prstatistics.com/course/bioacoustics-for-ecologists-hardware-survey-design-and-data-analysis-biac01/

17. July 1st – 5th 2019
DATA VISUALISATION AND MANIPULATION USING PYTHON (DVMP01)
Glasgow, Scotland, Dr. Martin Jones
http://www.prinformatics.com/course/data-visualisation-and-manipulation-using-python-dvmp01/

18. July 8th – 12th 2019
INTRODUCTION TO BAYESIAN HIERARCHICAL MODELLING USING R (IBHM03)
Glasgow, Scotland, Dr. Andrew Parnell
https://www.psstatistics.com/course/introduction-to-bayesian-hierarchical-modelling-using-r-ibhm03/

19. July 29th – August 2nd 2019
INTRODUCTION TO SPATIAL ANALYSIS OF ECOLOGICAL DATA USING R (ISPE01)
Glasgow, Scotland, Dr. Jakub Nowosad
https://www.prstatistics.com/course/introduction-to-spatial-analysis-of-ecological-data-using-r-ispe01/

20. September 2nd – 6th 2019
APPLIED METHODS FOR ANALYSING CAPTURE-RECAPTURE (MARK-RECAPTURE) DATA USING
SPATIALLY EXPLICIT AND NON-SPATIAL TECHNIQUES (MARK01)
Glasgow, Scotland, Dr. Joanne Potts, Dr. David Borchers
https://www.prstatistics.com/course/applied-methods-for-analysing-capture-recapture-mark-recapture-data-using-spatially-explicit-and-non-spatial-techniques-mark01/

21. September 9th – 13th
MICROBIOME DATA ANALYSIS USING QIIME2 (MBQM01)
Glasgow, Scotland, Dr. Yoshiki Vazquez Baeza, Dr. Antonio Gonzalez Pena
https://www.prinformatics.com/course/microbiome-data-analysis-using-qiime2-mbqm01/

22. September 16th – 20th 2019
R PACKAGE DESIGN AND DEVELOPMENT AND REPRODUCIBLE DATA SCIENCE FOR
BIOLOGISTS (RPKG01)
Glasgow, Scotland, Dr. Cory Merow, Dr. Andy Rominger
https://www.prstatistics.com/course/r-package-design-and-development-and-reproducible-data-science-for-biologists-rpkg01/

23. September 30th – October 4th 2019
GEOMETRIC MORPHOMETRICS USING R (GMMR02)
Glasgow, Scotland, Prof. Dean Adams, Prof. Michael Collyer, Dr. Antigoni
Kaliontzopoulou
http://www.prstatistics.com/course/geometric-morphometrics-using-r-gmmr02/

24. October 7th – 11th 2019
GENERAL ADDITIVE MODELS (GAM) AND MIXED MODELS (GAMM) (GAMM01)
Glasgow, Scotland, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/general-additive-models-gam-and-mixed-models-gamm-gamm01/

25. October 7th – 11th 2019
CONSERVATION PLANNING USING PRIORITIZR : FROM THEORY TO PRACTICE (PRTZ01)
Athens, GREECE, Dr Richard Schuster and Nina Morell
https://www.prstatistics.com/course/conservation-planning-using-prioritizr-from-theory-to-practice-prtz01/

26. October 21st – 25th 2019
A COMPLETE GUIDE TO MIXED MODELS (INCLUDING TEMPORAL AND SPATIAL
AUTOCORRELATION) (MMTS01)
Athens, GREECE, Dr Aristides (Aris) Moustakas
https://www.prstatistics.com/course/a-complete-guide-to-mixed-models-including-temporal-and-spatial-autocorrelation-mmts01/

27. November 18th – 22nd 2019
INTRODUCTION TO STRUCTURED POPULATION MODELS AND DEMOGRAPHIC DISTRIBUTION
MODELS (IIPM01)
Athens, GREECE, Dr Cory Merow
https://www.prstatistics.com/course/introduction-to-structured-population-models-and-demographic-distribution-models-iipm01/

28. November 25th – 29th 2019
ADVANCED RANGE, NICHE, AND DISTRIBUTION MODELING (ASDM01)
Athens, GREECE, Dr Cory Merow
https://www.prstatistics.com/course/advanced-range-niche-and-distribution-modeling-asdm01/


-- 
Oliver Hooker PhD.
PR statistics

2018 publications -
Alternative routes to piscivory: Contrasting growth trajectories in brown
trout (Salmo trutta) ecotypes exhibiting contrasting life history
strategies. Ecology of Freshwater Fish.

Phenotypic and resource use partitioning amongst sympatric lacustrine brown
trout, Salmo trutta. Biological Journal of the Linnean Society. DOI
10.1093/biolinnean/bly032

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