[R-sig-genetics] R-sig-genetics Digest, Vol 33, Issue 4

[Nelly]

Hello,
Large data set ? 
I tried the same command and it took me three days to finish it (using a Mac with 32 GB of RAM)

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> Today's Topics:
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>   1. Query regarding DAPC using ADEGENT in R (Bhuller, Ravneet)
> 
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> ----------------------------------------------------------------------
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> Message: 1
> Date: Wed, 31 Aug 2016 09:39:18 +0000
> From: "Bhuller, Ravneet" <ravneet.bhuller13 at imperial.ac.uk>
> To: "r-sig-genetics at r-project.org" <r-sig-genetics at r-project.org>
> Subject: [R-sig-genetics] Query regarding DAPC using ADEGENT in R
> Message-ID: <F587D8F2-14BA-40CF-A6AD-D9272C7D29BF at ic.ac.uk>
> Content-Type: text/plain; charset="UTF-8"
> 
> Dear All,
> 
> I am trying to do DAPC on my genind object (app) using ADEGENET in R. But when I run the following command:
> 
> grp <- find.clusters(app)
> 
> it is processing continuously for more than 2 hours but not producing any output. Any guidance will be very much appreciated.
> 
> Regards,
> 
> Rav
> 
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> End of R-sig-genetics Digest, Vol 33, Issue 4
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