[R-sig-genetics] Pairwise Fst and G'st in R

[Jombart, Thibaut]

Dear Nevil, 

yes, I have just implemented a pairwise Fst in adegenet a few days ago. You'll need to install the devel version from R-forge:
install.packages("adegenet",repos="http://r-forge.r-project.org")

Then, have a look at the function pairwise.fst.

Best regards

Thibaut

--
######################################
Dr Thibaut JOMBART
MRC Centre for Outbreak Analysis and Modelling
Department of Infectious Disease Epidemiology
Imperial College - Faculty of Medicine
St Mary’s Campus
Norfolk Place
London W2 1PG
United Kingdom
Tel. : 0044 (0)20 7594 3658
t.jombart at imperial.ac.uk
http://sites.google.com/site/thibautjombart/
http://adegenet.r-forge.r-project.org/

________________________________________
From: r-sig-genetics-bounces at r-project.org [r-sig-genetics-bounces at r-project.org] On Behalf Of Nevil Amos [nevil.amos at optusnet.com.au]
Sent: 16 September 2010 00:48
To: r-sig-genetics at r-project.org
Subject: [R-sig-genetics] Pairwise Fst and G'st in R

Is anyone aware of functions(s) packages in R: thant caclulate pairwise
Fst and or G'st between all populations in a dataset?

cheers

Nevil Amos

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