[R-sig-eco] Multiple count if style "queries"

Eduard Szöcs szoe8822 at uni-landau.de
Sat May 21 00:23:53 CEST 2011


Using the reshape package:

require(reshape)
dfm <- melt(data2, id = "ECO_NAME")
dfc <- cast(dfm, ECO_NAME~variable, function(x) length(unique(x)))


Eduard

Am 20.05.2011 23:19, schrieb Chris Mcowen:
> Dear List,
>
> I am looking to calculate two things from my data frame and was after some advice. For the example below i want to know.
>
> 1. How many unique Orders/Families and Genera there are per eco-name
>
> 2. How many incidences are there for each Order/Family and Genus there are per eco-region
>
> I have 650 econame.
>
> I.e for Biak-Numfoor rain forests there are 2 orders, 2 families and two genera. Also, Alismatales are represented once, Asparagales once etc etc.
>
> Thanks for any advice.
>
> Chris
>
>
> ECO_NAME							Order		Family					Genus
> Biak-Numfoor rain forests				Alismatales		Araceae				Homalomena
> Biak-Numfoor rain forests				Asparagales		Orchidaceae			Bromheadia
> Central Range montane rain forests	Alismatales		Araceae				Homalomena
> Central Range montane rain forests	Asparagales		Lomandraceae		Cordyline
> Central Range montane rain forests	Asparagales		Orchidaceae			Thelymitra
> Central Range montane rain forests	Asparagales		Orchidaceae			Dendrobium
> Central Range montane rain forests	Asparagales		Orchidaceae			Vanda
> Central Range montane rain forests	Asparagales		Orchidaceae			Bulbophyllum
> Central Range montane rain forests	Asparagales		Orchidaceae			Bulbophyllum
> Central Range montane rain forests	Asparagales		Orchidaceae			Dendrobium
> Central Range montane rain forests	Asparagales		Orchidaceae			Dendrobium
> Central Range montane rain forests	Commelinales	Commelinaceae		Murdannia
> Central Range montane rain forests	Poales			Centrolepidaceae	Centrolepis
> Central Range montane rain forests	Poales			Cyperaceae			Machaerina
> Central Range montane rain forests	Poales			Cyperaceae			Eleocharis
> Central Range montane rain forests	Poales			Eriocaulaceae		Eriocaulon
> Central Range montane rain forests	Poales			Poaceae			Schizostachyum
> Central Range montane rain forests	Poales			Poaceae			Poa
> Central Range montane rain forests	Zingiberales		Zingiberaceae		Alpinia
> Central Range montane rain forests	Zingiberales		Zingiberaceae		Curcuma
> Central Range montane rain forests	Zingiberales		Zingiberaceae		Amomum
> Huon Peninsula montane rain forests	Asparagales		Orchidaceae			Taeniophyllum
> Huon Peninsula montane rain forests	Asparagales		Orchidaceae			Corybas
> Huon Peninsula montane rain forests	Asparagales		Orchidaceae			Thelymitra
> Huon Peninsula montane rain forests	Asparagales		Orchidaceae			Glomera
> Huon Peninsula montane rain forests	Poales			Centrolepidaceae	Centrolepis
> Huon Peninsula montane rain forests	Poales			Poaceae			Poa
>
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