[R-sig-Debian] revolution mkl with R 3.01 on Ubuntu 13.04

Elizabeth Tighe tighe at brandeis.edu
Fri Jul 19 04:14:16 CEST 2013


Dirk,  That worked! Sort of.  It's gone from running processes on one 
processor to two processors and Rbenchmark ran in 64 seconds rather than 
178.  Is there a way to get it to use more than 2 processors when it 
can?  (revo mkl used all available processors by default).

many thanks!
Liz


On 7/18/2013 8:36 PM, Dirk Eddelbuettel wrote:
>
> On 18 July 2013 at 18:03, Elizabeth Tighe wrote:
> |
> | So I have two Dell power-edge machines running latest Ubuntu (13.04)
> | with latest version of R (3.01).  I installed revolution-mkl on one
> | machine (T-410) and it works fine.  On the second machine (T-620), it
> | says the latest version of revolution-mkl is installed, but I'm getting
> | no multi-processor functioning (R-benchmark-25.R) runs on a single
> | processor and takes same amount of time before and after installing.
> |
> | Both machines I've installed using simple sudo apt-get install r-base
> | r-base-dev and same for revolution-mkl
>
> The revo-mkl package is stale. It was a one-off; its 'closed source but
> freely distributed' annoyed a lot of people, and Revo no longer cares about
> Ubuntu (or Debian).
>
> | Anyone have any tips for debugging, figuring out why it's not working on
> | the second machine?  Is there a way to get R to find the mkl libraries
> | without reinstalling from scratch from source code?
> |
> | Any insights anyone out there might have would be appreciated!
>
> Just install libopenblas-dev --- it is also multithreaded, but open source
> and under development (as a successor to the not-really-open-source GotoBLAS).
>
> Dirk
>



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