[R-sig-DB] Postgresql Options for Mac OS X

Paul Gilbert pg||bert @end|ng |rom b@nk-b@nque-c@n@d@@c@
Tue May 12 01:14:24 CEST 2009


Neil Tiffin wrote:
> In trying to figure out how the best way to access a postgresql 
> database from R on Mac OS X. Currently my database has 88 million rows 
> (9 GB) and is growing so I am looking for a stable interface.  The 
> following options seem to be available:
>
> 1. RdbiPgSQL_1.18.1
> 2. RPostgreSQL_0.1-4
> 3. TSPostgreSQL_2009.3-2
>
> These packages seemed to be obsolete and no longer supported/recommended:
>
> 4. RPgSQL 1.0
> 5. Rdbi 0.1.2
>
> Results
> ======
> #1 relies on #5 and has an older connection syntax.
> #2 appears relatively new and has not reached 1.0 status yet.  For 
> someone used to libpq the interface is very familiar.
> #3 relies on #2 and not sure what it adds as the docs did not install 
> correctly, nor are they accessible from CRAN.
> All 3 packages compiled and installed on Mac OS X even though #2 and 
> #3 reported failures in CRAN.
> Have not tried to actually use them yet.
>
> Conclusion
> =========
> Use #2 even though it does not seem very mature.
Yes. (#3 is specific to time series dbs.  ) Another option is odbc.
I'm not sure why you had problems with the docs.  I think the testing 
problems on CRAN may have to do with the testing machine (not having a 
working Postgres?).

Paul
>
> Questions
> ========
> Is this a good summary of the state of accessing postgresql from R or 
> have I missed something?
>
> Is RPostgreSQL being used anyplace and is it stable?
>
> Neil
> Chicago
>
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