[R-pkg-devel] How Do I Solve This Two Notes From R Package Auto-check?

[Uwe Ligges]

On 18.06.2022 22:11, Andrew Simmons wrote:
> Hello,
> 
> 
> I wouldn't worry about the message for invalid URLs, I've been seeing that
> message too on my computer but it doesn't appear when I submit to CRAN.
> 
> 
> The second message looks like one of your scripts is creating some
> temporary files that are not being deleted. If you had something like
> 
> FILE <- tempfile()
> 
> in your examples or vignettes or tests, just make sure to add
> 
> unlink(FILE)
> 
> to the end of the file.

Looks like these are leftovers from a stated parallel cluster. I guess 
one that you forgot to close ins examples/vignettes or tests.

Best,
Uwe Ligges



> 
> On Sat, Jun 18, 2022, 16:05 Econometrics Autocorrelation via
> R-package-devel <r-package-devel using r-project.org> wrote:
> 
>> I received these as reasons why my R package is rejected each time I
>> submit it and have tried to resolve it but cannot. the first one is invalid
>> URLs one of which is "https://www.jstor.org/stable/2241719" which I
>> include in the .Rmd file in the vignette folder. which I include as [place
>> holder](https://www.jstor.org/stable/2241719). the second "checking for
>> detritus in the temp directory ... NOTE"
>> Please help me on how to solve this problem?
>>
>> * using log directory 'd:/RCompile/CRANincoming/R-devel/OBL.Rcheck'
>> * using R Under development (unstable) (2022-06-17 r82501 ucrt)
>> * using platform: x86_64-w64-mingw32 (64-bit)
>> * using session charset: UTF-8
>> * checking for file 'OBL/DESCRIPTION' ... OK
>> * checking extension type ... Package
>> * this is package 'OBL' version '0.1.0'
>> * package encoding: UTF-8
>> * checking CRAN incoming feasibility ... NOTE
>> Maintainer: 'Daniel James <futathesis using gmail.com>'
>>
>> New submission
>>
>> Found the following (possibly) invalid URLs:
>>    URL: https://www.jstor.org/stable/2241719
>>      From: inst/doc/OBL.html
>>      Status: 403
>>      Message: Forbidden
>> * checking package namespace information ... OK
>> * checking package dependencies ... OK
>> * checking if this is a source package ... OK
>> * checking if there is a namespace ... OK
>> * checking for hidden files and directories ... OK
>> * checking for portable file names ... OK
>> * checking whether package 'OBL' can be installed ... OK
>> * checking installed package size ... OK
>> * checking package directory ... OK
>> * checking for future file timestamps ... OK
>> * checking 'build' directory ... OK
>> * checking DESCRIPTION meta-information ... OK
>> * checking top-level files ... OK
>> * checking for left-over files ... OK
>> * checking index information ... OK
>> * checking package subdirectories ... OK
>> * checking R files for non-ASCII characters ... OK
>> * checking R files for syntax errors ... OK
>> * checking whether the package can be loaded ... OK
>> * checking whether the package can be loaded with stated dependencies ...
>> OK
>> * checking whether the package can be unloaded cleanly ... OK
>> * checking whether the namespace can be loaded with stated dependencies
>> ... OK
>> * checking whether the namespace can be unloaded cleanly ... OK
>> * checking loading without being on the library search path ... OK
>> * checking use of S3 registration ... OK
>> * checking dependencies in R code ... OK
>> * checking S3 generic/method consistency ... OK
>> * checking replacement functions ... OK
>> * checking foreign function calls ... OK
>> * checking R code for possible problems ... [14s] OK
>> * checking Rd files ... [0s] OK
>> * checking Rd metadata ... OK
>> * checking Rd line widths ... OK
>> * checking Rd cross-references ... OK
>> * checking for missing documentation entries ... OK
>> * checking for code/documentation mismatches ... OK
>> * checking Rd \usage sections ... OK
>> * checking Rd contents ... OK
>> * checking for unstated dependencies in examples ... OK
>> * checking contents of 'data' directory ... OK
>> * checking data for non-ASCII characters ... OK
>> * checking LazyData ... OK
>> * checking data for ASCII and uncompressed saves ... OK
>> * checking R/sysdata.rda ... OK
>> * checking installed files from 'inst/doc' ... OK
>> * checking files in 'vignettes' ... OK
>> * checking examples ... NONE
>> * checking for unstated dependencies in vignettes ... OK
>> * checking package vignettes in 'inst/doc' ... OK
>> * checking re-building of vignette outputs ... [28s] OK
>> * checking PDF version of manual ... OK
>> * checking for detritus in the temp directory ... NOTE
>> Found the following files/directories:
>>    'Rscript179dc2a2e45ca' 'Rscript1ac42a2e45ca'
>> * DONE
>> Status: 2 NOTEs
>>
>>
>>
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>>
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