[R-pkg-devel] rcmdcheck reports wrong version of lattice

[Thierry Onkelinx]

Yes, This was the problem. The recent version of lattice was in my home
folder ~/R/x86_64-pc-linux-gnu-library/4.0 (first element of .libPaths()).
An older version of lattice was in /usr/lib/R/library (last element of
.libPaths()).

install.packages("lattice", lib = "/usr/lib/R/library") solved the problem.

So it looks like rcmdcheck ignored the first element of .libPaths(). I'm
not sure if that is a bug of rcmdcheck. Shall I report an issue?

Best regards,

Thierry

ir. Thierry Onkelinx
Statisticus / Statistician

Vlaamse Overheid / Government of Flanders
INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE AND
FOREST
Team Biometrie & Kwaliteitszorg / Team Biometrics & Quality Assurance
thierry.onkelinx using inbo.be
Havenlaan 88 bus 73, 1000 Brussel
www.inbo.be

///////////////////////////////////////////////////////////////////////////////////////////
To call in the statistician after the experiment is done may be no more
than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not
ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey
///////////////////////////////////////////////////////////////////////////////////////////

<https://www.inbo.be>


Op ma 8 mrt. 2021 om 17:28 schreef Gábor Csárdi <csardi.gabor using gmail.com>:

> Hi,
>
> If you think this is a bug in rcmdcheck, then please report an issue
> here: https://github.com/r-lib/rcmdcheck/issues
>
> My guess is that you have another version of lattice in another
> library, and that version is used with `--as-cran`.
>
> Gabor
>
> On Mon, Mar 8, 2021 at 5:18 PM Thierry Onkelinx
> <thierry.onkelinx using inbo.be> wrote:
> >
> > Dear all,
> >
> > rcmdcheck::rcmdcheck() runs fine on my package.
> rcmdcheck::rcmdcheck(args
> > = c("--as-cran")) reports an error: package ‘lattice’ was installed
> before
> > R 4.0.0: please re-install it
> > The error persists, even when I reinstall lattice.
> >
> > What am I missing?
> >
> > Best regards,
> >
> > Thierry
> >
> > sessioninfo::session_info("lattice")
> > ─ Session info
> >
> ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
> >  setting  value
> >  version  R version 4.0.4 (2021-02-15)
> >  os       Ubuntu 18.04.5 LTS
> >  system   x86_64, linux-gnu
> >  ui       RStudio
> >  language nl_BE:nl
> >  collate  nl_BE.UTF-8
> >  ctype    nl_BE.UTF-8
> >  tz       Europe/Brussels
> >  date     2021-03-08
> >
> > ─ Packages
> >
> ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
> >  package * version date       lib source
> >  lattice   0.20-41 2020-04-02 [1] CRAN (R 4.0.4)
> >
> >
> > ir. Thierry Onkelinx
> > Statisticus / Statistician
> >
> > Vlaamse Overheid / Government of Flanders
> > INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE
> AND
> > FOREST
> > Team Biometrie & Kwaliteitszorg / Team Biometrics & Quality Assurance
> > thierry.onkelinx using inbo.be
> > Havenlaan 88 bus 73, 1000 Brussel
> > www.inbo.be
> >
> >
> ///////////////////////////////////////////////////////////////////////////////////////////
> > To call in the statistician after the experiment is done may be no more
> > than asking him to perform a post-mortem examination: he may be able to
> say
> > what the experiment died of. ~ Sir Ronald Aylmer Fisher
> > The plural of anecdote is not data. ~ Roger Brinner
> > The combination of some data and an aching desire for an answer does not
> > ensure that a reasonable answer can be extracted from a given body of
> data.
> > ~ John Tukey
> >
> ///////////////////////////////////////////////////////////////////////////////////////////
> >
> > <https://www.inbo.be>
> >
> >         [[alternative HTML version deleted]]
> >
> > ______________________________________________
> > R-package-devel using r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-package-devel
>

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