[R-pkg-devel] Error during automatic check for vignette re-building - The magick package is required to crop

[Pablo Fonseca]

Dear Duncan Murdoch,

Thank you for the quickly reply. Yes, the package is on Github. Any comment or suggestion will be very welcome.

https://github.com/pablobio/GALLO

Kind regards.

Pablo Augusto de Souza Fonseca, Ph.D.
Postdoctoral Fellow at University of Guelph
Centre for Genetic Improvement of Livestock
E pfonseca using uoguelph.ca  <mailto:pfonseca using uoguelph.ca>
W http://animalbiosciences.uoguelph.ca/abscpeople/pfonseca  <http://animalbiosciences.uoguelph.ca/abscpeople/pfonseca>
________________________________
From: Duncan Murdoch <murdoch.duncan using gmail.com>
Sent: Thursday, November 5, 2020 11:22 AM
To: Pablo Fonseca <pfonseca using uoguelph.ca>; r-package-devel using r-project.org <r-package-devel using r-project.org>
Subject: Re: [R-pkg-devel] Error during automatic check for vignette re-building - The magick package is required to crop

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On 05/11/2020 10:55 a.m., Pablo Fonseca wrote:
> Dear all,
>
> Currently I am trying to update my package (GALLO) with some small edits in the code. However, the package is not passing in the automatic check. I am getting only two warnings:
>
> The first one is a warning related with the maintainer email (my email in the case), which is correct. I really think that this is not the cause of the package failure during the automatic checking.

The first one is actually about your version number:  you called it
version 1.0, but CRAN already has 1.0.  You need to increase the number.


>
> The second warning is a problem during the vignette rebuilding. The warning is "The magick package is required to crop". In my first submission I didn't experience this error. In the recent submissions for updates, I included the magick package as a dependency of the package. However, this didn't fixed the issue. Additionally, I can't reproduce the errors in my machines, even when running R CMD check --as-cran. The error seems to be related with the lines 465-495 from the vignette. I double checked the code and introduced some small changes (such as reducing the figure dimensions).

I am not sure about this one; I'd need to look at the package to check.
Is it on Github?

Duncan Murdoch

>
> Have ever someone faced a similar issue? However, it seems ineffective. Is there any possibility to be a false negative?
>
> I am sending bellow the links for the check logs.
>
> package GALLO_1.0.tar.gz does not pass the incoming checks automatically, please see the following pre-tests:
> Windows: <https://win-builder.r-project.org/incoming_pretest/GALLO_1.0_20201105_154946/Windows/00check.log>
> Status: 2 WARNINGs
> Debian: <https://win-builder.r-project.org/incoming_pretest/GALLO_1.0_20201105_154946/Debian/00check.log>
> Status: 2 WARNINGs
>
> Last released version's CRAN status: ERROR: 1, WARN: 11
> See: <https://CRAN.R-project.org/web/checks/check_results_GALLO.html>
>
>
> Kind regards.
>
>
> Pablo Augusto de Souza Fonseca, Ph.D.
> Postdoctoral Fellow at University of Guelph
> Centre for Genetic Improvement of Livestock
> E pfonseca using uoguelph.ca  <mailto:pfonseca using uoguelph.ca>
> W http://animalbiosciences.uoguelph.ca/abscpeople/pfonseca  <http://animalbiosciences.uoguelph.ca/abscpeople/pfonseca>
>
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