[R-pkg-devel] Error vignette rebuilding and package imports when re-submitting package

[Georgi Boshnakov]

Just add 

importFrom(Rdpack,  reprompt) 

in the NAMESPACE file (any function from Rdpack will do). 

Georgi Boshnakov

-----Original Message-----
From: R-package-devel <r-package-devel-bounces using r-project.org> On Behalf Of Paul SAVARY
Sent: 15 April 2020 10:15
To: r-package-devel using r-project.org
Subject: [R-pkg-devel] Error vignette rebuilding and package imports when re-submitting package

Hello, 

I'm having trouble re-submitting a package (graph4lg). 

- With r-patched_osx, vignette rebuilding fails with the following message : 

checking re-building of vignette outputs ... [12s/16s] WARNING
Error(s) in re-building vignettes: 
... 
--- re-building ‘vignette_graph4lg.Rmd’ using rmarkdown
dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15) Expected in: /usr/lib/libSystem.B.dylib 

dyld: Symbol not found: ____chkstk_darwin Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15) Expected in: /usr/lib/libSystem.B.dylib 

Error: processing vignette 'vignette_graph4lg.Rmd' failed with diagnostics: 
pandoc document conversion failed with error 6
--- failed re-building ‘vignette_graph4lg.Rmd’ 

SUMMARY: processing the following file failed: 
‘vignette_graph4lg.Rmd’ 

Error: Vignette re-building failed. 
Execution halted 

- Besides, although I removed some unused packages from the imports in DESCRIPTION file, I still obtain this message : 

checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: 
‘Imap’ ‘Rdpack’ ‘ade4’ ‘doBy’ ‘mclust’ 
All declared Imports should be used. 

Except Rdpack which is needed to build the vignette, I removed these packages. 

Finally, although I submit version 0.4.0, I receive checking errors relative to version 0.3.0. 

I thank you in advance for your feedbacks. 
Regards
Paul Savary 







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