[R-pkg-devel] Error vignette rebuilding and package imports when re-submitting package
georg|@bo@hn@kov @end|ng |rom m@nche@ter@@c@uk
Thu Apr 16 09:29:58 CEST 2020
in the NAMESPACE file (any function from Rdpack will do).
From: R-package-devel <r-package-devel-bounces using r-project.org> On Behalf Of Paul SAVARY
Sent: 15 April 2020 10:15
To: r-package-devel using r-project.org
Subject: [R-pkg-devel] Error vignette rebuilding and package imports when re-submitting package
I'm having trouble re-submitting a package (graph4lg).
- With r-patched_osx, vignette rebuilding fails with the following message :
checking re-building of vignette outputs ... [12s/16s] WARNING
Error(s) in re-building vignettes:
--- re-building ‘vignette_graph4lg.Rmd’ using rmarkdown
dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15) Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: ____chkstk_darwin Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15) Expected in: /usr/lib/libSystem.B.dylib
Error: processing vignette 'vignette_graph4lg.Rmd' failed with diagnostics:
pandoc document conversion failed with error 6
--- failed re-building ‘vignette_graph4lg.Rmd’
SUMMARY: processing the following file failed:
Error: Vignette re-building failed.
- Besides, although I removed some unused packages from the imports in DESCRIPTION file, I still obtain this message :
checking dependencies in R code ... NOTE Namespaces in Imports field not imported from:
‘Imap’ ‘Rdpack’ ‘ade4’ ‘doBy’ ‘mclust’
All declared Imports should be used.
Except Rdpack which is needed to build the vignette, I removed these packages.
Finally, although I submit version 0.4.0, I receive checking errors relative to version 0.3.0.
I thank you in advance for your feedbacks.
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