[R-pkg-devel] Number of cores in examples

Uwe Ligges ||gge@ @end|ng |rom @t@t|@t|k@tu-dortmund@de
Mon Sep 16 03:27:49 CEST 2019


The message came from a CRAN team member, so please ask the CRAN team 
member who found that issue if you cannot work it out. Readers of this 
list cannot help unless reading the sources of your package that you 
have not shared with the list.

Note that CRAN team members may also make mistakes given there are 
dozens of new submissions on a single day.

Best,
Uwe Ligges





On 15.09.2019 19:49, John Harrold wrote:
> Hello Max,
> 
> The comment I received was:
> 
> Please ensure that you do not use more than 2 cores in your examples.
> 
> I believe the only output I received was these incoming pretest results:
> 
> https://win-builder.r-project.org/incoming_pretest/ubiquity_1.0.0_20190821_023712/
> 
> Feel free to browse through them.
> 
> Thanks
> John
> 
> On Sun, Sep 15, 2019 at 10:26 AM Max Turgeon <Max.Turgeon using umanitoba.ca>
> wrote:
> 
>> Hi John,
>>
>>
>>  From the R-hub output you shared with us, we can see that you don't get
>> the error on Ubuntu with R-devel, nor on Windows with R-3.6.1. When you
>> received the original email from CRAN with the check output, on which
>> platform did you get the error about using too many cores? Perhaps that
>> info could help narrow it down, or at least you would know on which
>> platform to test.
>>
>>
>> Max Turgeon
>> Assistant Professor
>> Department of Statistics
>> Department of Computer Science
>> University of Manitoba
>> maxturgeon.ca
>>
>>
>> ------------------------------
>> *From:* R-package-devel <r-package-devel-bounces using r-project.org> on behalf
>> of John Harrold <john.m.harrold using gmail.com>
>> *Sent:* September 15, 2019 11:31:38 AM
>> *To:* Uwe Ligges
>> *Cc:* r-package-devel using r-project.org
>> *Subject:* Re: [R-pkg-devel] Number of cores in examples
>>
>> Howdy Folks,
>>
>> I'm testing this on R-hub, and I've set option in the environment. I put
>> links to the Windows and Ubuntu outputs below. I've searched for the
>> obvious (core, parallel, etc), but I'm not really sure what I need to look
>> for to indicate that more than one core is being used. If someone could
>> point it out to me I'd be very grateful.
>>
>> Windows:
>>
>> https://drive.google.com/file/d/1187cRyrJLFJetaOW3WHL-mLTCTwYxOeG/view?usp=sharing
>>
>> Ubuntu:
>>
>> https://drive.google.com/file/d/1XhaKFpaPaRyJLvHuFcbWNyztzYpsLj8r/view?usp=sharing
>>
>> Thanks
>> John
>>
>>
>>
>> On Sun, Sep 15, 2019 at 12:42 AM Uwe Ligges <
>> ligges using statistik.tu-dortmund.de>
>> wrote:
>>
>>>
>>>
>>> On 15.09.2019 05:39, John Harrold wrote:
>>>> Thanks Uwe,
>>>>
>>>> Is there a way to find out on my end where this is happening?
>>>
>>> Yes, simply set the env var
>>> _R_CHECK_LIMIT_CORES_=true
>>> to reproduce.
>>>
>>> Best,
>>> Uwe
>>>
>>>>
>>>> Thanks
>>>> john
>>>>
>>>> On Fri, Sep 13, 2019 at 10:51 PM Uwe Ligges
>>>> <ligges using statistik.tu-dortmund.de
>>>> <mailto:ligges using statistik.tu-dortmund.de
>> <ligges using statistik.tu-dortmund.de>>> wrote:
>>>>
>>>>
>>>>
>>>>      On 14.09.2019 03:33, John Harrold wrote:
>>>>       > Hello,
>>>>       >
>>>>       > I recently submitted a package for consideration in CRAN. One of
>>> the
>>>>       > comments was:
>>>>       >
>>>>       > Please ensure that you do not use more than 2 cores in your
>>> examples.
>>>>       >
>>>>       > I do not believe my package does this. Is this a general comment
>>>>      for a
>>>>       > package that requires doParallel or was this triggered because
>>>>      one of my
>>>>       > examples actually used more than 2 cores?
>>>>
>>>>      The latter. In examples, vignettes and tests you must not start
>> more
>>>>      than 2 workers as resources for CRAN checks are limited.
>>>>
>>>>      Best,
>>>>      Uwe Ligges
>>>>
>>>>
>>>>       >
>>>>       > Thanks
>>>>       > John
>>>>       >
>>>>
>>>>
>>>>
>>>> --
>>>> John
>>>> :wq
>>>
>>
>>
>> --
>> John
>> :wq
>>
>>          [[alternative HTML version deleted]]
>>
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>>
> 
>



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