[R-pkg-devel] False Positive WARNING in devtools::check_built

[Michael Dewey]

Dear Jarrett

Not clear what is going on here but that seems to be an error in your 
source code not the documentation file as you hint.

Michael

On 03/05/2019 15:02, Jarrett Phillips wrote:
> Hello,
> 
> 
> I have run devtools::check_built() on my package tarball to ensure the
> presence of no ERRORS/WARNINGS or NOTES. The below WARNING was found:
> 
> 
> W  checking for unstated dependencies in examples ...
> 
>     Warning: parse error in file 'HACSim-Ex.R':
> 
>     197:17: unexpected symbol
> 
>     196: # user prompted to select appropriate FASTA file of
> 
>     197: aligned/trimmed DNA
> 
>                                              ^
> 
> 
> My documentation doesn't run up to line 197. All documentation is below 100
> lines in length.
> 
> 
> Prior to a small fix (changing \dontrun to \donttest), my package had zero
> WARNINGS, ERRORS and NOTES.
> 
> 
> The WARNING seems to stem from the 'DNA' reference within the comment.
> 
> 
> Is the above WARNING a false positive?
> 
> 
> i recently updated to R 3.5.3, could this have caused this issue?
> 
> 
> 
> Thanks!
> 
> 
> 
> Cheers,
> 
> 
> Jarrett
> 
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> 
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-- 
Michael
http://www.dewey.myzen.co.uk/home.html