[R-pkg-devel] Vignette timing out on test server

[Roy Mendelssohn - NOAA Federal]

Thanks muchly.  That looks like I what I was after.  otherwise I was going to have to put tictoc on each chunk.

-Roy

> On Apr 17, 2019, at 2:21 AM, Iñaki Ucar <iucar using fedoraproject.org> wrote:
> 
> On Wed, 17 Apr 2019 at 02:41, Roy Mendelssohn - NOAA Federal via
> R-package-devel <r-package-devel using r-project.org> wrote:
>> ---------- Forwarded message ----------
>> From: Roy Mendelssohn - NOAA Federal <roy.mendelssohn using noaa.gov>
>> To: "Maëlle SALMON via R-package-devel" <r-package-devel using r-project.org>
>> Cc:
>> Bcc:
>> Date: Tue, 16 Apr 2019 17:41:21 -0700
>> Subject: Vignette timing out on test server
>> Hi All:
>> 
>> The package I am trying to get ready for submission has a Vignette that does a number of data downloads and some complicate maps with satellite images.  While it knits on my computer,  on checks it times out.  I am looking for ways to speed it up,  but my question is, is  there a command or a way to profile a vignette as it knits to  have a record to see which chunks are using up how much time?
>> 
>> I realize CRAN only runs the vignette code to check that it runs, but it must have a time limit because I am consistently hitting time outs on test machines.  So ti would help me if I can identify where all the time is.
> 
> There you go:
> 
> https://stackoverflow.com/questions/24595280/timing-for-chunks
> https://stackoverflow.com/questions/30530008/hook-to-time-knitr-chunks
> 
> -- 
> Iñaki Úcar

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Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
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