[R-pkg-devel] Help with the warning : 'BiocInstaller' and 'biocLite()' are deprecated, use the 'BiocManager' CRAN

[Yonghui Dong]

Dear all,

I remember somebody has asked a similar question days ago, but the problem has not been solved. I am sorry that I ask this question again.

My package can pass the CMD check in my local PC, while when I submit my package to CRAN, there is one warning:

>Found the following significant warnings:
Warning: 'BiocInstaller' and 'biocLite()' are deprecated, use the 'BiocManager' CRAN

One of my R package dependencies is a bioconductor package xcms. It seems that packages from Bioconducor cannot be installed now.

More details are given in the directory:

https://win-builder.r-project.org/incoming_pretest/Miso_0.2.1_20190304_095427/Windows/ <https://win-builder.r-project.org/incoming_pretest/Miso_0.2.1_20190304_095427/Windows/>

Thanks a lot for your help.

Dong
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