[R-pkg-devel] Documentation Cross-reference Unexpected Warning

[Uwe Ligges]

You need

\link[limma]{limFit}

see Writing R Extensions.

Best,
Uwe Ligges


On 13.05.2018 04:00, Dario Strbenac wrote:
> Good day,
> 
> If limma has already been installed, such as by
> 
> source("https://bioconductor.org/biocLite.R")
> biocLite("limma")
> 
> and the attached minimalist R package is built and checked, a warning is emitted about the cross-reference in the documentation file. The Writing R Extensions manual states that the [packageName] specifier would only be needed to "... refer to not-yet-installed packages ..." but in this case, limma is already installed and is in the library path. Is the warning a false positive? I am using the latest release of R.
> 
> * using R version 3.5.0 (2018-04-23)
> * using platform: x86_64-pc-linux-gnu (64-bit)
> * using session charset: UTF-8
> 
> --------------------------------------
> Dario Strbenac
> University of Sydney
> Camperdown NSW 2050
> Australia
> 
> 
> 
> ______________________________________________
> R-package-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel
>