[R-pkg-devel] R CMD check not finding my vignettes

David Hugh-Jones davidhughjones at gmail.com
Mon Apr 10 17:13:32 CEST 2017


Hi Berry,

Good call, and I would have been very embarrassed if so, but no. Actually,
if they had been, I guess they would not have appeared in the tarball.

Cheers,
David

On 10 April 2017 at 14:57, Berry Boessenkool <berryboessenkool at hotmail.com>
wrote:

>
> The "missing" files or their directory are not by accident listed in
> Rbuildignore, right?
>
>
>
> ________________________________
> From: R-package-devel <r-package-devel-bounces at r-project.org> on behalf
> of Uwe Ligges <ligges at statistik.tu-dortmund.de>
> Sent: Friday, April 7, 2017 12:20
> To: David Hugh-Jones
> Cc: r-package-devel at r-project.org
> Subject: Re: [R-pkg-devel] R CMD check not finding my vignettes
>
> Can you send the tarball please, I can take a look,
> Uwe
>
>
> On 07.04.2017 12:09, David Hugh-Jones wrote:
> > Hi Uwe,
> >
> > Indeed yes, but my built tarball has got the files in inst/doc as shown.
> > If I then run 'R CMD check' on that tarball, I get the error quoted. Is
> > there something happening that I don't understand?
> >
> > Incidentally, the tarball also has files in the vignettes directory: (a)
> > the original .Rmd files and (b) HTML files. My original directory has
> > all of Rmd, HTML and PDF files in the vignettes directory, but for some
> > reason the PDFs don't get included when the tarball is built.
> >
> > Cheers,
> > David
> >
> > David
> >
> > On 7 April 2017 at 07:15, Uwe Ligges <ligges at statistik.tu-dortmund.de
> > <mailto:ligges at statistik.tu-dortmund.de>> wrote:
> >
> >     I do not know devtools, but the vignette sources should be placed in
> >     ./vignettes and then R CMD build will put the files into the
> >     relevant places automatically.
> >
> >     Best,
> >     Uwe Ligges
> >
> >
> >
> >
> >
> >
> >     On 07.04.2017 07:55, David Hugh-Jones wrote:
> >
> >          Okay, so this got tumbleweeded... so should I file a bug?
> >
> >         D
> >
> >         On Thu, 6 Apr 2017 at 15:37, David Hugh-Jones
> >         <davidhughjones at gmail.com <mailto:davidhughjones at gmail.com>>
> >         wrote:
> >
> >
> >             Before building my package, I manually place both pdf and
> >             html versions of
> >             my vignettes into inst/doc. I then build the package with
> >             `devtools::check`.
> >
> >             Listing of the resulting tarball:
> >
> >             -rw-r--r--  0 david  staff    1692  6 Apr 15:10
> >             huxtable/inst/doc/design-principles.R
> >
> >             -rw-r--r--  0 david  staff    6697  6 Apr 15:10
> >             huxtable/inst/doc/design-principles.Rmd
> >
> >             -rw-r--r--  0 david  staff  899765  6 Apr 15:10
> >             huxtable/inst/doc/design-principles.html
> >
> >             -rw-r--r--  0 david  staff  213776  6 Apr 15:10
> >             huxtable/inst/doc/design-principles.pdf
> >
> >             -rw-r--r--  0 david  staff    3009  6 Apr 15:10
> >             huxtable/inst/doc/huxreg.R
> >
> >             -rw-r--r--  0 david  staff    5521  6 Apr 15:10
> >             huxtable/inst/doc/huxreg.Rmd
> >
> >             -rw-r--r--  0 david  staff  940955  6 Apr 15:10
> >             huxtable/inst/doc/huxreg.html
> >
> >             -rw-r--r--  0 david  staff  237771  6 Apr 15:10
> >             huxtable/inst/doc/huxreg.pdf
> >
> >             -rw-r--r--  0 david  staff   10473  6 Apr 15:11
> >             huxtable/inst/doc/huxtable.R
> >
> >             -rw-r--r--  0 david  staff   20552  6 Apr 15:11
> >             huxtable/inst/doc/huxtable.Rmd
> >
> >             -rw-r--r--  0 david  staff  925373  6 Apr 15:11
> >             huxtable/inst/doc/huxtable.html
> >
> >             -rw-r--r--  0 david  staff  284978  6 Apr 15:11
> >             huxtable/inst/doc/huxtable.pdf
> >
> >             However, R CMD check then complains:
> >
> >             * checking package vignettes in ‘inst/doc’ ... WARNING
> >             Package vignettes without corresponding PDF/HTML:
> >                ‘design-principles.Rmd’
> >                ‘huxreg.Rmd’
> >                ‘huxtable.Rmd’
> >
> >             What gives?
> >
> >             Cheers,
> >             David
> >
> >
>
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