[R-pkg-devel] R CMD check not finding my vignettes

Berry Boessenkool berryboessenkool at hotmail.com
Mon Apr 10 15:57:18 CEST 2017


The "missing" files or their directory are not by accident listed in Rbuildignore, right?



________________________________
From: R-package-devel <r-package-devel-bounces at r-project.org> on behalf of Uwe Ligges <ligges at statistik.tu-dortmund.de>
Sent: Friday, April 7, 2017 12:20
To: David Hugh-Jones
Cc: r-package-devel at r-project.org
Subject: Re: [R-pkg-devel] R CMD check not finding my vignettes

Can you send the tarball please, I can take a look,
Uwe


On 07.04.2017 12:09, David Hugh-Jones wrote:
> Hi Uwe,
>
> Indeed yes, but my built tarball has got the files in inst/doc as shown.
> If I then run 'R CMD check' on that tarball, I get the error quoted. Is
> there something happening that I don't understand?
>
> Incidentally, the tarball also has files in the vignettes directory: (a)
> the original .Rmd files and (b) HTML files. My original directory has
> all of Rmd, HTML and PDF files in the vignettes directory, but for some
> reason the PDFs don't get included when the tarball is built.
>
> Cheers,
> David
>
> David
>
> On 7 April 2017 at 07:15, Uwe Ligges <ligges at statistik.tu-dortmund.de
> <mailto:ligges at statistik.tu-dortmund.de>> wrote:
>
>     I do not know devtools, but the vignette sources should be placed in
>     ./vignettes and then R CMD build will put the files into the
>     relevant places automatically.
>
>     Best,
>     Uwe Ligges
>
>
>
>
>
>
>     On 07.04.2017 07:55, David Hugh-Jones wrote:
>
>          Okay, so this got tumbleweeded... so should I file a bug?
>
>         D
>
>         On Thu, 6 Apr 2017 at 15:37, David Hugh-Jones
>         <davidhughjones at gmail.com <mailto:davidhughjones at gmail.com>>
>         wrote:
>
>
>             Before building my package, I manually place both pdf and
>             html versions of
>             my vignettes into inst/doc. I then build the package with
>             `devtools::check`.
>
>             Listing of the resulting tarball:
>
>             -rw-r--r--  0 david  staff    1692  6 Apr 15:10
>             huxtable/inst/doc/design-principles.R
>
>             -rw-r--r--  0 david  staff    6697  6 Apr 15:10
>             huxtable/inst/doc/design-principles.Rmd
>
>             -rw-r--r--  0 david  staff  899765  6 Apr 15:10
>             huxtable/inst/doc/design-principles.html
>
>             -rw-r--r--  0 david  staff  213776  6 Apr 15:10
>             huxtable/inst/doc/design-principles.pdf
>
>             -rw-r--r--  0 david  staff    3009  6 Apr 15:10
>             huxtable/inst/doc/huxreg.R
>
>             -rw-r--r--  0 david  staff    5521  6 Apr 15:10
>             huxtable/inst/doc/huxreg.Rmd
>
>             -rw-r--r--  0 david  staff  940955  6 Apr 15:10
>             huxtable/inst/doc/huxreg.html
>
>             -rw-r--r--  0 david  staff  237771  6 Apr 15:10
>             huxtable/inst/doc/huxreg.pdf
>
>             -rw-r--r--  0 david  staff   10473  6 Apr 15:11
>             huxtable/inst/doc/huxtable.R
>
>             -rw-r--r--  0 david  staff   20552  6 Apr 15:11
>             huxtable/inst/doc/huxtable.Rmd
>
>             -rw-r--r--  0 david  staff  925373  6 Apr 15:11
>             huxtable/inst/doc/huxtable.html
>
>             -rw-r--r--  0 david  staff  284978  6 Apr 15:11
>             huxtable/inst/doc/huxtable.pdf
>
>             However, R CMD check then complains:
>
>             * checking package vignettes in ‘inst/doc’ ... WARNING
>             Package vignettes without corresponding PDF/HTML:
>                ‘design-principles.Rmd’
>                ‘huxreg.Rmd’
>                ‘huxtable.Rmd’
>
>             What gives?
>
>             Cheers,
>             David
>
>

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