[R] RSQLite slowness

Rasmus Liland jr@| @end|ng |rom po@teo@no
Wed Oct 6 20:49:55 CEST 2021

Thank you Bert, I set up a new thread on 
BioStars [1].  So far, I'm a bit 
unfamilliar with Bioconductor (but will 
hopefully attend a course about it in 
November, which I'm kinda hyped about), 
other than installing and updating R 
packages using BiocManager ....  Did you 
think of something else than 
BioStars.org when saying «Bioconductor?»

The question could be viewed as gene 
related, but I think it is really about 
how can one easier than with sqlite 
handle large tsv files, and why is that 
parser thing so slow ...  I think this 
is more like a core R thing than gene 
related question ...  

[1] https://www.biostars.org/p/9492486/

-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 833 bytes
Desc: not available
URL: <https://stat.ethz.ch/pipermail/r-help/attachments/20211006/659983b5/attachment.sig>

More information about the R-help mailing list