[R] Error in is biallelic

John Kane jrkr|de@u @end|ng |rom gm@||@com
Sat Nov 7 03:36:48 CET 2020


Ah, good point.

On Fri, 6 Nov 2020 at 20:24, David Winsemius <dwinsemius using comcast.net> wrote:

>
> On 11/6/20 4:11 PM, John Kane wrote:
> > I think we need a lot mole information.
> >
> > see these links for suggestions on how to ask a question.
> >
> >   http://adv-r.had.co.nz/Reproducibility.html
> >
> >
> http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example
>
> I agree that more information would be needed for a considered answer
> but I also suspect that placement of the question in a venue that had a
> larger population of persons knowledgeable about the domain of genomics
> might be helpful as well. Two possibilities: The BioConductor mailing
> list and the BioInformatics StackExchange forum.
>
> --
>
> David
>
> >
> >
> > On Fri, 6 Nov 2020 at 14:37, Sakthipriya M <
> sakthipriyamathavaraj using gmail.com>
> > wrote:
> >
> >> Hi,
> >> am trying to run the following using my SNP data vcf file
> >> maizelight <- vcfR2genlight(maizevcf,n.cores=1)
> >> Why am getting error
> >> Error in is.biallelic(x) :
> >>    trying to get slot "fix" from an object (class "spec_tbl_df") that
> is not
> >> an S4 object
> >>
> >> anybody help to solve this, am just trying comments of R newly.
> >> ______________________________________________
> >> R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
> >> https://stat.ethz.ch/mailman/listinfo/r-help
> >> PLEASE do read the posting guide
> >> http://www.R-project.org/posting-guide.html
> >> and provide commented, minimal, self-contained, reproducible code.
> >>
> >
>


-- 
John Kane
Kingston ON Canada

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