[R] Using read.table for importing gz file

J H j@me@hum@humphrey@ @end|ng |rom gm@||@com
Sat Aug 10 21:35:29 CEST 2019


Unsubscribe

On Sat, 10 Aug 2019 at 20:30, Spencer Brackett <
spbrackett20 using saintjosephhs.com> wrote:

> Hello,
>
> I am trying to read the following Xena dataset into R for data analysis:
>
> https://tcga.xenahubs.net/download/TCGA.GBMLGG.sampleMap/HumanMethylation450.gz
>
> I tried to run the following read.table(gzfile("HumanMethylation450.gz")),
> but R ended up crashing as a result.
>
> Is there perhaps a way to use read.table with fread in some way to do this?
>
> Many thanks,
>
> Spencer
>
>         [[alternative HTML version deleted]]
>
> ______________________________________________
> R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>

	[[alternative HTML version deleted]]



More information about the R-help mailing list