[R] Using read.table for importing gz file

Spencer Brackett @pbr@ckett20 @end|ng |rom @@|ntjo@ephh@@com
Sat Aug 10 21:29:28 CEST 2019


Hello,

I am trying to read the following Xena dataset into R for data analysis:
https://tcga.xenahubs.net/download/TCGA.GBMLGG.sampleMap/HumanMethylation450.gz

I tried to run the following read.table(gzfile("HumanMethylation450.gz")),
but R ended up crashing as a result.

Is there perhaps a way to use read.table with fread in some way to do this?

Many thanks,

Spencer

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