[R] need help to work with Boolnet package

[Jim Lemon]

Okay, perhaps if you try this:

cellcontrol<-
 loadNetwork("C:/Users/mohammad/Documents/cellcontrol.txt")
stateTransition(cellcontrol, rep(1,11))

Obviously this is a guess, but it might help.

Jim


On Mon, May 23, 2016 at 1:55 PM, mohammad alsharaiah
<mohdsharaiah at gmail.com> wrote:
> Hi jim ,
> first of all iwant to thank you for your reply.
> the object "cellcontrol" its a network that i created it by using  boolnet
> package. when i call the network its loaded inside the R workspace screen.
> but i got this error when i want to work on it.
>
> boolnet allow to us to create the network and write a logical rules  in text
> file, then we can loaded it as a network inside R to study the dynamic
> behavior.
>
> but i can not work on it because this error and converting it to data file.
>
>
>
>
>
>
>
> Mohammad
>
>
> On Sun, May 22, 2016 at 8:40 PM, Jim Lemon <drjimlemon at gmail.com> wrote:
>>
>> Hi Mohammad,
>> I don't have the BoolNet package installed, but the error means that
>> the object "cellcontrol" is not there for the function to use. It
>> should be a network "generated by generateRandomNKNetwork, or
>> reconstructed by reconstructNetwork" as detailed in the help pages.
>>
>> Jim
>>
>>
>> On Mon, May 23, 2016 at 11:07 AM, mohammad alsharaiah
>> <mohdsharaiah at gmail.com> wrote:
>> > Hi,
>> >
>> > every one , im using Boolnet package inside R environment to create a
>> > boolean network.
>> >
>> > after i create a text file for the Boolean network  and  i loaded it by
>> > using R  by using this command:
>> >
>> >  > library(BoolNet)
>> >> loadNetwork("C:/Users/mohammad/Documents/cellcontrol.txt")
>> >
>> > then its loaded inside R screen. But when i started to do some of tasks
>> > on
>> > this network every time i got this error message, this is an example how
>> > i
>> > work on the created network and get the error.
>> >
>> >> stateTransition(cellcontrol, rep(1,11))
>> > Error in inherits(network, "BooleanNetwork") :
>> >   object 'cellcontrol' not found
>> >>
>> >
>> > please can any one help me to solve this error .
>> >
>> > Reagdrs,
>> >
>> >
>> >
>> >
>> > *Mohammad *
>> >
>> >         [[alternative HTML version deleted]]
>> >
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>
>