[R] p values from GLM
murdoch.duncan at gmail.com
Sat Apr 2 02:01:12 CEST 2016
On 01/04/2016 6:46 PM, Bert Gunter wrote:
> ... of course, whether one **should** get them is questionable...
They're just statistics. How could it hurt to look at them?
> Bert Gunter
> "The trouble with having an open mind is that people keep coming along
> and sticking things into it."
> -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
> On Fri, Apr 1, 2016 at 3:26 PM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote:
>> On 01/04/2016 6:14 PM, John Sorkin wrote:
>>> How can I get the p values from a glm ? I want to get the p values so I
>>> can add them to a custom report
>>> glm(data[,"JWean"]~data[,"Group"],data=data,family=binomial(link ="logit"))
>>> summary(fitwean) # This lists the coefficeints, SEs, z and p
>>> values, but I can't isolate the pvalues.
>>> names(summary(fitwean)) # I see the coefficients, but not the p values
>>> names(fitmens) # p values are not found here.
>> Doesn't summary(fitwean) give a matrix? Then it's
>> colnames(summary(fitwean)$coefficients) you want, not names(fitwean).
>> Duncan Murdoch
>> P.S. If you had given a reproducible example, I'd try it myself.
>>> Thank you!
>>> John David Sorkin M.D., Ph.D.
>>> Professor of Medicine
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