[R] p values from GLM
Duncan Murdoch
murdoch.duncan at gmail.com
Sat Apr 2 00:26:06 CEST 2016
On 01/04/2016 6:14 PM, John Sorkin wrote:
> How can I get the p values from a glm ? I want to get the p values so
I can add them to a custom report
>
>
> fitwean<-
glm(data[,"JWean"]~data[,"Group"],data=data,family=binomial(link ="logit"))
> summary(fitwean) # This lists the coefficeints, SEs, z
and p values, but I can't isolate the pvalues.
> names(summary(fitwean)) # I see the coefficients, but not the p values
> names(fitmens) # p values are not found here.
Doesn't summary(fitwean) give a matrix? Then it's
colnames(summary(fitwean)$coefficients) you want, not names(fitwean).
Duncan Murdoch
P.S. If you had given a reproducible example, I'd try it myself.
>
> Thank you!
> John
>
> John David Sorkin M.D., Ph.D.
> Professor of Medicine
> Chief, Biostatistics and Informatics
> University of Maryland School of Medicine Division of Gerontology and
Geriatric Medicine
> Baltimore VA Medical Center
> 10 North Greene Street
> GRECC (BT/18/GR)
> Baltimore, MD 21201-1524
> (Phone) 410-605-7119
> (Fax) 410-605-7913 (Please call phone number above prior to faxing)
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