[R] non-conformable arguments

Thierry Onkelinx thierry.onkelinx at inbo.be
Mon Mar 30 14:52:42 CEST 2015


We need enough information to run your code on our computer and get the
same error as you. In this case we are missing the data. See e.g.
http://adv-r.had.co.nz/Reproducibility.html If you can't provide the
original data, then try to make a (small) example which reproduces your
problem.

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

To call in the statistician after the experiment is done may be no more
than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not
ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey

2015-03-30 14:47 GMT+02:00 Soheila Khodakarim <lkhodakarim op gmail.com>:

> Dear Thierry Onkelinx,
>
> Thank you so much to answer me. But I do not know what information I
> should send for you
> I want to run neural network on my data.I run these codes and I saw this
> Error in the last line
>
> #load mydata
> dim(mydata)
> # 20 3111
> library(neuralnet)
> fm <- as.formula(paste("resp ~", paste(colnames(mydata)[1:3110],
> collapse="+")))
> out <- neuralnet(fm,data=mydata, hidden = 4, lifesign = "minimal",
> linear.output = FALSE, threshold = 0.1)
> Call: neuralnet(formula = fm, data = mydata, hidden = 4, threshold = 0.1,
>     lifesign = "minimal", linear.output = FALSE)
>
> 1 repetition was calculated.
>
>         Error Reached Threshold Steps
> 1 2.402157856     0.06958374995     9
> #load testset
> dim(testset)
> # 20 3111
> out.results <- compute(out, testset)
> Error in neurons[[i]] %*% weights[[i]] : non-conformable arguments
>
>
> Regards,
> Soheila
>
>

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