[R] how to build a heatmap like this

[Jeff Newmiller]

Your question is hard to follow (too much genetics jargon?), and because you posted using HTML instead of plain text your table (?) is corrupted also.

You should read [1], [2], and might consider looking at Bioconductor [3].

[1] Posting Guide, mentioned at the bottom of this email
[2] http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example
[3] http://www.bioconductor.org

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Sent from my phone. Please excuse my brevity.

On October 22, 2014 6:44:58 PM PDT, escaping <young_2304 at hotmail.com> wrote:
>Hi, everyone,
>
>I am a new R user, and was required to build several heatmaps as shown
>in attached file. To reach it, I need to normalize the RPKM data  of
>exon-level expression to generate Z-score using R. The data looks like
>mpleId
>
>			
>				geneName
>
>			
>				start
>
>			
>				end
>
>			
>				rpkm
>
>		
>
>
>				PC10-6
>
>			
>				KIF1B
>
>			
>				10270764
>
>			
>				10270936
>
>			
>				4.00059
>
>		
>
>
>				PC10-6
>
>			
>				KIF1B
>
>			
>				10292308
>
>			
>				10292492
>
>			
>				35.3023
>
>		
>
>
>				PC10-6
>
>			
>				KIF1B
>
>			
>				10316305
>
>			
>				10316381
>
>			
>				85.9611
>
>		
>
>
>				PC10-6
>
>			
>				KIF1B
>
>			
>				10318551
>
>			
>				10318730
>
>			
>				64.5961
>Exons and introns are required to shown on the heatmap.
>
>Does anyone know how to do it? 
>
>Thanks a lot!
>
>Yizi
>
>
>
>  		 	   		  
>
>------------------------------------------------------------------------
>
>______________________________________________
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>PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.