[R] Fwd: Plot the means with simultaneous horizontal and vertical error bars

Sarah Goslee sarah.goslee at gmail.com
Fri Jul 18 23:42:33 CEST 2014


On Fri, Jul 18, 2014 at 5:38 PM, Ahmed Attia <ahmedatia80 at gmail.com> wrote:
> Yes, I saw this but I can't translate it to a code.
>
> http://svitsrv25.epfl.ch/R-doc/library/Hmisc/html/errbar.html

Why are you reading the help for Hmisc::errbar when I suggested (and
copied and pasted for you!) the function plotCI from the plotrix
package?

The examples in ?plotCI demonstrate having horizontal and vertical
error bars, as cited in the bit I copied and pasted for you.

Please also reply all so your message returns to the R-help list, and
not just to me, so others can participate and benefit.

Sarah

>
> I looked at this but it produces the vertical bars only.
>
> AA
>
> Ahmed M. Attia
>
>
> Research Assistant
> Dept. of Soil&Crop Sciences
> Texas A&M University
> ahmed.attia at ag.tamu.edu
> Cell phone: 001-979-248-5215
> FAX: 001-308-455-4024
>
>
>
> On Fri, Jul 18, 2014 at 4:29 PM, Sarah Goslee <sarah.goslee at gmail.com> wrote:
>> Did you read the help?
>>
>>      err: The direction of error bars: "x" for horizontal, "y" for
>>           vertical ("xy" would be nice but is not implemented yet;
>>           don't know quite how everything would be specified.  See
>>           examples for composing a plot with simultaneous horizontal
>>           and vertical error bars)
>>
>> Sarah
>>
>> On Fri, Jul 18, 2014 at 5:22 PM, Ahmed Attia <ahmedatia80 at gmail.com> wrote:
>>> Sarah,
>>>
>>> PlotCI provides the vertical CI bars only. Do you have any idea?
>>>
>>> plotCI(x=means, uiw=ciw)
>>>
>>>   # prettier
>>>   plotCI(x=means, uiw=ciw, col="black", barcol="blue", lwd=1)
>>>
>>>
>>> AA
>>>
>>> Ahmed M. Attia
>>>
>>>
>>> Research Assistant
>>> Dept. of Soil&Crop Sciences
>>> Texas A&M University
>>> ahmed.attia at ag.tamu.edu
>>> Cell phone: 001-979-248-5215
>>> FAX: 001-308-455-4024
>>>
>>>
>>>
>>> On Fri, Jul 18, 2014 at 4:00 PM, Sarah Goslee <sarah.goslee at gmail.com> wrote:
>>>> You could try plotCI from the plotrix package.
>>>>
>>>> Note that most attachments are stripped; dput() is the preferred way
>>>> to include data.
>>>>
>>>> Sarah
>>>>
>>>> On Fri, Jul 18, 2014 at 4:41 PM, Ahmed Attia <ahmedatia80 at gmail.com> wrote:
>>>>> Dear R users,
>>>>>
>>>>> I would appreciate your help in plotting the means with simultaneous
>>>>> horizontal and vertical error bars. I use the lineplot.CI but it creates
>>>>> the vertical bars only.
>>>>>
>>>>>
>>>>> The attached file has the dataset that I want to graph. The (X) is the
>>>>> x-axis values and (y Lint) is the response in y-axis. Therefore, values in
>>>>> the x-axis would be 150, 350, 550, .....etc.
>>>>>
>>>>> At each value of the x-axis would be the average response point (y Lint)
>>>>> with vertical and horizontal error bars.
>>>>>
>>>>> Each value of the x-axis (X) represents a range of values that in x Water.
>>>>> The x Water column should be used to draw the horizontal lines.
>>>>>
>>>>> Thank you so much.
>>>>>
>>>>> AA
>>>>>
>>>>>
>>>>>
>>>>
>>>> --
>>>> Sarah Goslee
>>>> http://www.functionaldiversity.org



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