[R] hc2Newick is different than th hclust dendrogram
Jose Hleap Lozano
jshleap at Dal.Ca
Fri Apr 1 22:47:55 CEST 2011
Hi R helpers... I am having troubles because of the discrepancy
between the dendrogram plotted from hclust and what is wrote in the
hc2Newick file. I've got a matrix C:
> hc <- hclust(dist(C))
both things draw completely different "trees"...
I have also tried with the raw distance matrix D and also the agnes
function, but the same happens. The hclus and agnes dendrogram is
logical, whereas the newick tree is not.
Thanks for any help!
Jose Sergio Hleap Lozano, M. Sc.
Ph. D. Student, Dalhousie University
Researcher, SQUALUS Foundation
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