[R] Cubic B-spline, how to numerically integrate?

David Winsemius dwinsemius at comcast.net
Fri May 14 17:57:54 CEST 2010


On May 14, 2010, at 11:41 AM, Claudia Penaloza wrote:

> (corrected version of previous posting)
>
> I fit a GAM to turtle growth data following methods in Limpus &  
> Chaloupka
> 1997 (http://www.int-res.com/articles/meps/149/m149p023.pdf).
>
> I want to obtain figures similar to Fig 3 c & f in Limpus & Chaloupka
> (1997), which according to the figure legend are "expected size-at-age
> functions" obtained by numerically integrating "size-specific growth  
> rate
> functions derived using cubic B-spline fit to GAM predicted values".
>
> I was able to fit the cubic-B spline, but I do not know how to  
> "numerically
> integrate" it.

You need to give us the function and the appropriate limits of  
integration.

>
> Can anybody help please?
>
> Code and figures here:
> https://docs.google.com/fileview?id=0B1cQ7z9xYFl2ZTZhMmMyMjAtYTA3Zi00N2QyLTkxNzMtOGYyMjdiOGU2ZWE4&hl=en
>
> Thank you,
> Claudia
-- 

David Winsemius, MD
West Hartford, CT



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