[R] Using constrOptim() function
spencerg
spencer.graves at prodsyse.com
Thu Jun 4 14:14:02 CEST 2009
It looks to me like you need to add "x" to the arguments in your
call to "constrOptim", something like the following:
constrOptim(beta_i, myFunction, NULL, ui, ci, mu = 1e-04, control = list(),
method = "Nelder-Mead", outer.iterations = 100, outer.eps = 1e-05, x=x)
The first "x" in "x=x" tells "constrOptim" that this is a named
argument. Since it's NOT the name of an argument for "constrOptim", it
must be part of the "..." argument, which is offered to "f", which in
this case is "myFunction". The second "x" in "x=x" tells "constrOptim"
to pass your global variable "x" for this purpose.
If this does not work, please submit another post, providing a
simpler, self contained example. Define "myFunction" as something
simple to define that still generates your error. Then someone can copy
your code into R, run it and see your error. That will tend on average
to increase the probability of a response as well as its speed and
utility.
Hope this helps,
Spencer
Ali Mahani wrote:
> I have a function myFunction(beta,x) where beta is a vector of coefficients
> and x is a data frame (think of it as a matrix). I want to optimize the
> function myFunction() by ONLY changing beta, i.e. x stays constant, with 4
> constraints. I have the following code (with a separate source file for the
> function):
>
> rm(list=ls())
> source('mySourceFile')
> x=read.csv("myFile.csv",head=TRUE,sep=",")
> beta_i=c(1,1,1,1,1,1,-1)
> ui=rbind(c(1,0,0,0,0,0,0),c(0,1,0,0,0,0,0),c(0,0,1,0,0,0,0),c(0,0,0,0,0,0,-1))
> ci=c(0,0,0,0)
> constrOptim(beta_i, myFunction, NULL, ui, ci, mu = 1e-04, control = list(),
> method = "Nelder-Mead", outer.iterations = 100, outer.eps = 1e-05)
>
> I am getting this error:
>
> Error in f(theta, ...) : argument "x" is missing, with no default
>
> If I replace myFunction with myFunction(beta,x) I get this error:
>
> Error in beta * feature_1[i, ] : non-numeric argument to binary operator
>
> If I try myFunction(beta_i,x) I get:
>
> Error in constrOptim(beta_i, mirror_lf(beta_i, x), NULL, ui, ci, mu = 1e-04,
> :
> could not find function "f"
>
> Clearly, I don;t have a good understanding of how to use constrOptim() or
> optim() for that matter. Any guidance? Thank you!
>
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