[R] merging several dataframes from a list
Gabor Grothendieck
ggrothendieck at gmail.com
Wed Jan 21 09:47:02 CET 2009
What version of R are you using? I get this:
> do.call(cbind, mylist)
df1.pos df1.data df2.pos df2.data df3.pos df3.data
1 A 2 A 6 A 9
2 B 6 B 2 B 3
3 C 3 C 9 C 6
4 D 1 D 7 D 2
5 E 9 E 5 E 1
> R.version.string
[1] "R version 2.8.1 Patched (2008-12-26 r47350)"
In which case
> ALL <- do.call(cbind, mylist)
> ALL <- ALL[regexpr("data", names(ALL)) > 0]
> names(ALL) <- sub("[.].*", "", names(ALL))
> ALL
df1 df2 df3
1 2 6 9
2 6 2 3
3 3 9 6
4 1 7 2
5 9 5 1
On Wed, Jan 21, 2009 at 3:19 AM, Antje <niederlein-rstat at yahoo.de> wrote:
> Hi there,
>
> I have a list of dataframes (generated by reading multiple files) and all
> dataframes are comparable in dimension and column names. They also have a
> common column, which, I'd like to use for merging. To give a simple example
> of what I have:
>
> df1 <- data.frame(c(LETTERS[1:5]), c(2,6,3,1,9))
> names(df1) <- c("pos", "data")
> df3 <- df2 <- df1
> df2$data <- c(6,2,9,7,5)
> df3$data <- c(9,3,6,2,1)
> mylist <- list(df1,df2,df3)
> names(mylist) <- c("df1","df2","df3")
>
>> mylist
>
> $df1
> pos data
> 1 A 2
> 2 B 6
> 3 C 3
> 4 D 1
> 5 E 9
>
> $df2
> pos data
> 1 A 6
> 2 B 2
> 3 C 9
> 4 D 7
> 5 E 5
>
> $df3
> pos data
> 1 A 9
> 2 B 3
> 3 C 6
> 4 D 2
> 5 E 1
>
> If I use do.call("cbind"), I'll end up with something like this
>
> pos data pos data pos data
> 1 A 2 A 6 A 9
> 2 B 6 B 2 B 3
> 3 C 3 C 9 C 6
> 4 D 1 D 7 D 2
> 5 E 9 E 5 E 1
>
>
> but now, I don't know anymore which data comes from which dataframe... and I
> have the column "pos" multiple times...
>
> Instead I'd like to have it like this:
>
> pos df1 df2 df3
> 1 A 2 6 9
> 2 B 6 2 3
> 3 C 3 9 6
> 4 D 1 7 2
> 5 E 9 5 1
>
> How, can I realize it? (The list, I'm working with has not just 3 data
> frames like given in my example, so I need to automize it)
>
>
> Antje
>
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