[R] error with make

[Lana Schaffer]

Peter,
Isn't there a different form of cp that I can use?
cp -p
cp
Lana 

-----Original Message-----
From: Peter Dalgaard [mailto:p.dalgaard at biostat.ku.dk] 
Sent: Friday, February 13, 2009 1:21 PM
To: Lana Schaffer
Cc: r-help at r-project.org
Subject: Re: [R] error with make

Lana Schaffer wrote:
> Hi,
> I am trying to compile the R-dev version on a unix Suse machine and 
> got errors.
> Would someone be able to help me determine what to do to fix these 
> errors:
.....
> make[2]: Entering directory
> `/lustre/people/schaffer/R-devel/src/include'
> mkdir -p -- ../../include
> cp: getting attribute `trusted.lov' of `Rmath.h0': Operation not 
> permitted

A Valentines Day bug? (Fiancee not Faithful) :-)

Seriously, this looks like it could be related to

http://osdir.com/ml/file-systems.lustre.user/2007/msg01107.html

If so, then it is probably something very specific to SLES and the Lustre file system, and you need to use their support. You could try building in a separate directory though (mkdir ../BUILD ; cd ../BUILD ; ../R/configure && make).



> make[2]: *** [Rmath.h] Error 1
> make[2]: Leaving directory `/lustre/people/schaffer/R-devel/src/include'
> make[1]: *** [R] Error 1
> make[1]: Leaving directory `/lustre/people/schaffer/R-devel/src'
> make: *** [R] Error 1
> 
> 
> 
> 
> Lana Schaffer
> Biostatistics/Informatics
> The Scripps Research Institute
> DNA Array Core Facility
> La Jolla, CA 92037
> (858) 784-2263
> (858) 784-2994
> schaffer at scripps.edu
> 
> ______________________________________________
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-- 
    O__  ---- Peter Dalgaard             Øster Farimagsgade 5, Entr.B
   c/ /'_ --- Dept. of Biostatistics     PO Box 2099, 1014 Cph. K
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