[R] problem plotting with ggplot2
ONKELINX, Thierry
Thierry.ONKELINX at inbo.be
Fri Aug 28 23:18:43 CEST 2009
Remove the y=c2 from your histogram plot.
----------------------------------------------------------------------------
ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest
Cel biometrie, methodologie en kwaliteitszorg / Section biometrics, methodology and quality assurance
Gaverstraat 4
9500 Geraardsbergen
Belgium
tel. + 32 54/436 185
Thierry.Onkelinx at inbo.be
www.inbo.be
To call in the statistician after the experiment is done may be no more than asking him to perform a post-mortem examination: he may be able to say what the experiment died of.
~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data.
~ Roger Brinner
The combination of some data and an aching desire for an answer does not ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey
-----Oorspronkelijk bericht-----
Van: r-help-bounces at r-project.org [mailto:r-help-bounces at r-project.org] Namens romunov
Verzonden: vrijdag 28 augustus 2009 16:58
Aan: Gabor Grothendieck
CC: r-help at r-project.org
Onderwerp: Re: [R] problem plotting with ggplot2
Hello Gabor,
your suggestion running R in vanilla mode was fruitful. I can plot at least bars. How would you proceed. How can I root out "bad" package or whatever is causing this?
Cheers,
Roman
On Fri, Aug 28, 2009 at 4:48 PM, Gabor Grothendieck <ggrothendieck at gmail.com
> wrote:
> A few things to try.
>
> Try starting R using the --vanilla flag. From the Windows command
> line:
>
> rem change next line appropriately if needed cd \Program
> Files\R\R-2.9.1\bin Rgui --vanilla
>
> and see if it still happens. If that does not help
> try reinstalling R and all packages.
>
>
> On Fri, Aug 28, 2009 at 10:20 AM, romunov<romunov at gmail.com> wrote:
> > As far as I know, the packages are up to date. I have had identical
> problems
> > on 2.9.1 as well as on 2.8.1. I did a fresh install of 2.9.1 to no avail.
> > Here is my sessionInfo():
> >
> >> sessionInfo()
> > R version 2.9.1 (2009-06-26)
> > i386-pc-mingw32
> >
> > locale:
> >
> LC_COLLATE=Slovenian_Slovenia.1250;LC_CTYPE=Slovenian_Slovenia.1250;LC
> _MONETARY=Slovenian_Slovenia.1250;LC_NUMERIC=C;LC_TIME=Slovenian_Slove
> nia.1250
> >
> > attached base packages:
> > [1] stats graphics grDevices utils datasets grid methods
> > [8] base
> >
> > other attached packages:
> > [1] ggplot2_0.8.3 reshape_0.8.3 plyr_0.1.9 proto_0.3-8
> >
> > loaded via a namespace (and not attached):
> > [1] tools_2.9.1
> >
> > Cheers,
> > Roman
> >
> >
> >
> >
> > On Fri, Aug 28, 2009 at 10:05 AM, baptiste auguie <
> > baptiste.auguie at googlemail.com> wrote:
> >
> >> Hi,
> >>
> >> Have you checked that you have the latest version of ggplot2 and plyr?
> >> Please post your sessionInfo()
> >>
> >> HTH,
> >>
> >> baptiste
> >>
> >> 2009/8/28 romunov <romunov at gmail.com>
> >>
> >>> Dear R-Help subsribers,
> >>>
> >>> upon running into a wonderful ggplot2 package by accident, I
> >>> abruptly encountered another problem. Almost every command run
> >>> with ggplot2
> results
> >>> in some sort of error. The one below is far the most common one.
> >>> Kind people from ggplot2 mailing list couldn't manage to solve the
> >>> problem, so I'm re-posting it here to try my luck. I will
> >>> recommend myself for any tips
> on
> >>> how to solve this, as I would really benefit from using this package.
> >>>
> >>> > head(cebelice)
> >>> time c2
> >>> 1 00:00 0
> >>> 2 00:15 0
> >>> 3 00:30 0
> >>> 4 00:45 0
> >>> 5 01:00 0
> >>> 6 01:15 0
> >>> > dim(cebelice)
> >>> [1] 96 2
> >>> > ggplot(cebelice, aes(x=time, y=c2)) + geom_histogram()
> >>> Error in all.vars(as.formula(.$facets)) :
> >>> could not find function "as.formula"
> >>>
> >>>
> >>> This is straight from ggplot2 sample page for barplots:
> >>>
> >>> > c <- ggplot(mtcars, aes(factor(cyl))) c + geom_bar()
> >>> Error in get("transform", env = ., inherits = TRUE)(., ...) :
> >>> attempt to apply non-function
> >>>
> >>>
> >>> Sincerely yours,
> >>>
> >>> Roman
> >>>
> >>> [[alternative HTML version deleted]]
> >>>
> >>> ______________________________________________
> >>> R-help at r-project.org mailing list
> >>> https://stat.ethz.ch/mailman/listinfo/r-help
> >>> PLEASE do read the posting guide
> >>> http://www.R-project.org/posting-guide.html
> >>> and provide commented, minimal, self-contained, reproducible code.
> >>>
> >>
> >>
> >>
> >> --
> >> _____________________________
> >>
> >> Baptiste Auguié
> >>
> >> School of Physics
> >> University of Exeter
> >> Stocker Road,
> >> Exeter, Devon,
> >> EX4 4QL, UK
> >>
> >> http://newton.ex.ac.uk/research/emag
> >> ______________________________
> >>
> >>
> >
> > [[alternative HTML version deleted]]
> >
> >
> > ______________________________________________
> > R-help at r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
> >
> >
>
[[alternative HTML version deleted]]
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