[R] problem plotting with ggplot2

[Gabor Grothendieck]

Try removing various lines from your Rprofile.site file found in
\Program Files\R\R-2.9.1\etc.Rprofile.site
or other startup file; see
?Startup
from within R.

On Fri, Aug 28, 2009 at 10:57 AM, romunov<romunov at gmail.com> wrote:
> Hello Gabor,
>
> your suggestion running R in vanilla mode was fruitful. I can plot at least
> bars. How would you proceed. How can I root out "bad" package or whatever is
> causing this?
>
> Cheers,
> Roman
>
>
>
> On Fri, Aug 28, 2009 at 4:48 PM, Gabor Grothendieck
> <ggrothendieck at gmail.com> wrote:
>>
>> A few things to try.
>>
>> Try starting R using the --vanilla flag.  From the
>> Windows command line:
>>
>> rem change next line appropriately if needed
>> cd \Program Files\R\R-2.9.1\bin
>> Rgui --vanilla
>>
>> and see if it still happens.    If that does not help
>> try reinstalling R and all packages.
>>
>>
>> On Fri, Aug 28, 2009 at 10:20 AM, romunov<romunov at gmail.com> wrote:
>> > As far as I know, the packages are up to date. I have had identical
>> > problems
>> > on 2.9.1 as well as on 2.8.1. I did a fresh install of 2.9.1 to no
>> > avail.
>> > Here is my sessionInfo():
>> >
>> >> sessionInfo()
>> > R version 2.9.1 (2009-06-26)
>> > i386-pc-mingw32
>> >
>> > locale:
>> >
>> > LC_COLLATE=Slovenian_Slovenia.1250;LC_CTYPE=Slovenian_Slovenia.1250;LC_MONETARY=Slovenian_Slovenia.1250;LC_NUMERIC=C;LC_TIME=Slovenian_Slovenia.1250
>> >
>> > attached base packages:
>> > [1] stats     graphics  grDevices utils     datasets  grid      methods
>> > [8] base
>> >
>> > other attached packages:
>> > [1] ggplot2_0.8.3 reshape_0.8.3 plyr_0.1.9    proto_0.3-8
>> >
>> > loaded via a namespace (and not attached):
>> > [1] tools_2.9.1
>> >
>> > Cheers,
>> > Roman
>> >
>> >
>> >
>> >
>> > On Fri, Aug 28, 2009 at 10:05 AM, baptiste auguie <
>> > baptiste.auguie at googlemail.com> wrote:
>> >
>> >> Hi,
>> >>
>> >> Have you checked that you have the latest version of ggplot2 and plyr?
>> >> Please post your sessionInfo()
>> >>
>> >> HTH,
>> >>
>> >> baptiste
>> >>
>> >> 2009/8/28 romunov <romunov at gmail.com>
>> >>
>> >>> Dear R-Help subsribers,
>> >>>
>> >>>  upon running into a wonderful ggplot2 package by accident, I abruptly
>> >>> encountered another problem. Almost every command run with ggplot2
>> >>> results
>> >>> in some sort of error. The one below is far the most common one. Kind
>> >>> people
>> >>> from ggplot2 mailing list couldn't manage to solve the problem, so I'm
>> >>> re-posting it here to try my luck. I will recommend myself for any
>> >>> tips on
>> >>> how to solve this, as I would really benefit from using this package.
>> >>>
>> >>>  > head(cebelice)
>> >>>   time c2
>> >>> 1 00:00  0
>> >>> 2 00:15  0
>> >>> 3 00:30  0
>> >>> 4 00:45  0
>> >>> 5 01:00  0
>> >>> 6 01:15  0
>> >>> > dim(cebelice)
>> >>> [1] 96  2
>> >>> > ggplot(cebelice, aes(x=time, y=c2)) + geom_histogram()
>> >>> Error in all.vars(as.formula(.$facets)) :
>> >>>  could not find function "as.formula"
>> >>>
>> >>>
>> >>> This is straight from ggplot2 sample page for barplots:
>> >>>
>> >>> > c <- ggplot(mtcars, aes(factor(cyl)))
>> >>> > c + geom_bar()
>> >>> Error in get("transform", env = ., inherits = TRUE)(., ...) :
>> >>>  attempt to apply non-function
>> >>>
>> >>>
>> >>> Sincerely yours,
>> >>>
>> >>> Roman
>> >>>
>> >>>        [[alternative HTML version deleted]]
>> >>>
>> >>> ______________________________________________
>> >>> R-help at r-project.org mailing list
>> >>> https://stat.ethz.ch/mailman/listinfo/r-help
>> >>> PLEASE do read the posting guide
>> >>> http://www.R-project.org/posting-guide.html
>> >>> and provide commented, minimal, self-contained, reproducible code.
>> >>>
>> >>
>> >>
>> >>
>> >> --
>> >> _____________________________
>> >>
>> >> Baptiste Auguié
>> >>
>> >> School of Physics
>> >> University of Exeter
>> >> Stocker Road,
>> >> Exeter, Devon,
>> >> EX4 4QL, UK
>> >>
>> >> http://newton.ex.ac.uk/research/emag
>> >> ______________________________
>> >>
>> >>
>> >
>> >        [[alternative HTML version deleted]]
>> >
>> >
>> > ______________________________________________
>> > R-help at r-project.org mailing list
>> > https://stat.ethz.ch/mailman/listinfo/r-help
>> > PLEASE do read the posting guide
>> > http://www.R-project.org/posting-guide.html
>> > and provide commented, minimal, self-contained, reproducible code.
>> >
>> >
>
>