[R] Problem with Rmpi and snow - makeCluster(type="MPI") not working
Rainer M Krug
r.m.krug at gmail.com
Mon Nov 24 15:45:04 CET 2008
Hi
I managed tio install Rmpi and to load it, but I get the following
errormessage when I try to create an MPI cluster and R hangs (no
response):
library(Rmpi)
[head001:15781] mca: base: component_find: unable to open osc pt2pt:
file not found (ignored)
> library(snow)
> cl <- makeCluster(2, type = "MPI")
Rscript execution error: No such file or directory
Rscript execution error: No such file or directory
I am using the following version:
> version
_
platform x86_64-unknown-linux-gnu
arch x86_64
os linux-gnu
system x86_64, linux-gnu
status
major 2
minor 7.2
year 2008
month 08
day 25
svn rev 46428
language R
version.string R version 2.7.2 (2008-08-25)
>
Any help welcome,
Rainer
--
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
Biology, UCT), Dipl. Phys. (Germany)
Centre of Excellence for Invasion Biology
Faculty of Science
Natural Sciences Building
Private Bag X1
University of Stellenbosch
Matieland 7602
South Africa
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