[R] linux gplots install unhappy

Benilton Carvalho bcarvalh at jhsph.edu
Tue Feb 20 19:23:27 CET 2007


well, it's complaining because you don't have gtools installed.

how about:

install.packages("gplots", dep=T)

?

b

On Feb 20, 2007, at 1:17 PM, Randy Zelick wrote:

> Hello all,
>
> I use R on both windows and a "mainframe" linux installation (RedHat
> enterprise 3.0, which they tell me is soon to be upgraded to 4.0). On
> windows I installed the package gplots without trouble, and it  
> works fine.
> When I attempted to do the same on the unix computer, the following  
> error
> message was forthcoming:
>
>
>
>
> downloaded 216Kb
>
> * Installing *source* package 'gplots' ...
> ** R
> ** data
> ** inst
> ** preparing package for lazy loading
> Loading required package: gtools
> Warning in library(pkg, character.only = TRUE, logical = TRUE,  
> lib.loc =
> lib.loc) :
>           there is no package called 'gtools'
> Error: package 'gtools' could not be loaded
> Execution halted
> ERROR: lazy loading failed for package 'gplots'
> ** Removing '/n/fs/disk/resuser02/u/zelickr/R/library/gplots'
>
> The downloaded packages are in
>          /tmp/RtmpikM2JW/downloaded_packages
> Warning messages:
> 1: installation of package 'gplots' had non-zero exit status in:
> install.packages("gplots", lib = "~/R/library")
> 2: cannot create HTML package index in:
> tools:::unix.packages.html(.Library)
>
>
>
> Can someone provide the bit of information I need to progress with  
> this?
>
> Thanks very much,
>
> =Randy=
>
> R. Zelick				email: zelickr at pdx.edu
> Department of Biology			voice: 503-725-3086
> Portland State University		fax:   503-725-3888
>
> mailing:
> P.O. Box 751
> Portland, OR 97207
>
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>
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