[R] Installing Rstem on Mac Intel

Walter Rojas walterrojas at mac.com
Sat Aug 18 23:56:20 CEST 2007


Hi all.

How do I install Rstem on my mac os X, with Intel processor? I need  
Rstem in order to run de lsa package.

When I run the following command in the R interface:

install.packages("Rstem", repos = "http://www.omegahat.org/R",  type  
= "source"),

I get a whole bunch of errors, most of which referred to the dylib  
(see below).

Is there an Rstem package available for Intel Macs?

  Thanks in advance!
Tina.

...
mytestpointer targets in passing argument 1 of 'Rf_mkChar' differ in  
signedness
ld: warning can't open dynamic library: /Developer/SDKs/ 
MacOSX10.4u.sdk/Library/Frameworks/R.framework/Versions/2.5/Resources/ 
lib/libRblas.dylib referenced from: /Library/Frameworks/ 
R.framework/../R.framework/R (checking for undefined symbols may be  
affected) (No such file or directory, errno = 2)
ld: warning can't open dynamic library: /Developer/SDKs/ 
MacOSX10.4u.sdk/Library/Frameworks/R.framework/Versions/2.5/Resources/ 
lib/libgfortran.2.dylib referenced from: /Library/Frameworks/ 
R.framework/../R.framework/R (checking for undefined symbols may be  
affected) (No such file or directory, errno = 2)
ld: warning can't open dynamic library: /Developer/SDKs/ 
MacOSX10.4u.sdk/Library/Frameworks/R.framework/Versions/2.5/Resources/ 
lib/libgcc_s.1.dylib referenced from: /Library/Frameworks/ 
R.framework/../R.framework/R (checking for undefined symbols may be  
affected) (No such file or directory, errno = 2)
ld: warning can't open dynamic library: /Developer/SDKs/ 
MacOSX10.4u.sdk/Library/Frameworks/R.framework/Versions/2.5/Resources/ 
lib/libreadline.5.2.dylib referenced from: /Library/Frameworks/ 
R.framework/../R.framework/R (checking for undefined symbols may be  
affected) (No such file or directory, errno = 2)
ld: Undefined symbols:
___gcc_qadd referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libgcc_s.1.dylib
___gcc_qdiv referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libgcc_s.1.dylib
_dgemm_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_dsyrk_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_zgemm_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
___gcc_qmul referenced from libR expected to be defined in /Library/ 
Frameworks/R.fraWarning message:
installation of package 'Rstem' had non-zero exit status in:  
install.packages("Rstem", repos = "http://www.omegahat.org/R",
.o norwegian_stem.o portuguese_stem.o russian_stem.o spanish_stem.o  
swedish_stem.o utilities.o   -F/Library/Frameworks/R.framework/.. - 
framework R
** Removing '/Library/Frameworks/R.framework/Versions/2.5/Resources/ 
library/Rstem'
mework/Versions/2.5/Resources/lib/libgcc_s.1.dylib
___gcc_qsub referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libgcc_s.1.dylib
___floatdidf referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libgcc_s.1.dylib
_dcopy_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_dtrsm_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_daxpy_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_dswap_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_ddot_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_dasum_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_dscal_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_dnrm2_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_drot_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_drotg_ referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libRblas.dylib
_add_history referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline.5.2.dylib
_clear_history referenced from libR expected to be defined in / 
Library/Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline. 
5.2.dylib
_history_truncate_file referenced from libR expected to be defined  
in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_read_history referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline.5.2.dylib
_rl_attempted_completion_function referenced from libR expected to be  
defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_attempted_completion_over referenced from libR expected to be  
defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_basic_word_break_characters referenced from libR expected to be  
defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_callback_handler_install referenced from libR expected to be  
defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_callback_handler_remove referenced from libR expected to be  
defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_callback_read_char referenced from libR expected to be defined  
in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_completer_word_break_characters referenced from libR expected to  
be defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/ 
lib/libreadline.5.2.dylib
_rl_completion_append_character referenced from libR expected to be  
defined in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_completion_matches referenced from libR expected to be defined  
in /Library/Frameworks/R.framework/Versions/2.5/Resources/lib/ 
libreadline.5.2.dylib
_rl_line_buffer referenced from libR expected to be defined in / 
Library/Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline. 
5.2.dylib
_rl_readline_name referenced from libR expected to be defined in / 
Library/Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline. 
5.2.dylib
_stifle_history referenced from libR expected to be defined in / 
Library/Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline. 
5.2.dylib
_tilde_expand referenced from libR expected to be defined in /Library/ 
Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline.5.2.dylib
_write_history referenced from libR expected to be defined in / 
Library/Frameworks/R.framework/Versions/2.5/Resources/lib/libreadline. 
5.2.dylib
/usr/bin/libtool: internal link edit command failed
make: *** [Rstem.so] Error 1
chmod: /Library/Frameworks/R.framework/Versions/2.5/Resources/library/ 
Rstem/libs/ppc/*: No such file or directory
ERROR: compilation failed for package 'Rstem'



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