[R] RGui: windows-record and command history
Michael H. Prager
Mike.Prager at noaa.gov
Thu Mar 23 21:41:35 CET 2006
on 3/23/2006 2:42 PM Paul Murrell said the following:
> Hi
>
>
> Duncan Murdoch wrote:
>
>> On 3/23/2006 10:46 AM, Gabor Grothendieck wrote:
>>
>>
>>> On 3/23/06, Duncan Murdoch <murdoch at stats.uwo.ca> wrote:
>>>
>>>
>>>> On 3/23/2006 10:29 AM, Gabor Grothendieck wrote:
>>>>
>>>>
>>>>> On 3/23/06, Duncan Murdoch <murdoch at stats.uwo.ca> wrote:
>>>>>
>>>>>
>>>>>> On 3/23/2006 7:35 AM, Thomas Steiner wrote:
>>>>>>
>>>>>>
>>>>>>> a) How can I set the recording of all windows()-history forever to
>>>>>>> "true"? I want something like windows(record = TRUE) but not just for
>>>>>>> the window that opens then, but for all windows I will open ever.
>>>>>>>
>>>>>> options(graphics.record=TRUE)
>>>>>>
>>>>>> will make that happen for the rest of the session. To really make it
>>>>>> happen forever, you need to put this line in your Rprofile (see
>>>>>> ?Rprofile for where that comes from).
>>>>>>
>>>>>> Watch out though: the graphics history is stored in your current
>>>>>> workspace in memory, and it can get big. You might find you're running
>>>>>> out of memory if you store everything, and you'll find your .RData files
>>>>>> quite large if you save your workspace.
>>>>>>
>>>>>> On my todo list (but not for 2.3.0) is the possibility of setting a
>>>>>> default history length, perhaps defaulting to saving the last 2 or 3
>>>>>> pages.
>>>>>>
>>>>> Would it be feasible to have history on disk or perhaps the last
>>>>> m in memory and the last n (possibly Inf) on disk?
>>>>>
>>>> The history is just another R object. Saving big R objects on disk
>>>> might be desirable, but it would be a big change, so I'd call it
>>>> infeasible. I wouldn't want to get into special-casing this particular
>>>> R object: that way lies madness.
>>>>
>>>> However, since it is just an R object, it's available for R code to work
>>>> with, so someone who was interested in doing this could write a
>>>> contributed package that did it.
>>>>
>>> Are there R-level facilities to manipulate the history, not
>>> just the top?
>>>
>> Sure, it's a regular R object. You will need to read the source to know
>> how to interpret it, and since it's undocumented there's a risk of
>> changes in future R versions, but it's not very complicated. See my
>> message to Peter.
>>
>
>
> Be careful with this. The objects that are recorded on the display list
> are calls to graphics functions PLUS state information in a raw binary
> format. The display list was originally intended for reuse within the
> same R session (for redrawing the screen). If you try to save it and
> use it between sessions or (worse) between versions of R you could run
> into some nasty problems. For example, what if the graphics function
> interface has changed? what if the raw binary state information format
> has changed? what if the required packages are not installed? At
> best, your saved object produces errors; at worst it becomes completely
> useless and is unrecoverable.
>
> Paul
>
For that reason, there could be some benefit in saving desired graphics
externally as files -- under Windows, savePlot() can be used -- and
starting with a fresh graphics history in each R session.
I regularly use the R command
.SavedPlots <- NULL
in scripts to get rid of any old history. This seems to work fine, but
of course I would appreciate comments from those more knowledgeable
telling me what's wrong with it.
MHP
--
Michael Prager, Ph.D.
Population Dynamics Team, NMFS SE Fisheries Science Center
NOAA Center for Coastal Fisheries and Habitat Research
Beaufort, North Carolina 28516
http://shrimp.ccfhrb.noaa.gov/~mprager/
Opinions expressed are personal, not official. No
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