[R] Confidence interval for Tau-a or c-index to compare logistic lrm (binary) models with each other.
Frank E Harrell Jr
f.harrell at vanderbilt.edu
Tue Mar 22 19:46:22 CET 2005
Jan Verbesselt wrote:
> Dear R list,
>
> How can confidence interval be derived for e.g. the Tau-a coefficient or the
> c index (area under ROC curve) such that I can compare the fitted lrm
> (logistic) models with each other. Is this possible?
>
> The aim is to conclude that one model is significantly better than other
> model (a, b or c).
>
> y~a (continu)+ d(catergoric)
> y~b (continu)+ d(catergoric)
> y~c (continu)+ d(catergoric)
>
> I will look at residual deviance, the AIC, c-index en Tau-a to compare
> different logistic models (lrm Design package). All extra advice is mostly
> welcome!
>
> Regards,
> Jan
You can only do this if you have an independent test dataset that was
never used in model development or coefficient estimation. Given that,
look at the rcorrp.cens function in Hmisc.
Frank Harrell
>
> _______________________________________________________________________
> ir. Jan Verbesselt
> Research Associate
> Lab of Geomatics Engineering K.U. Leuven
> Vital Decosterstraat 102. B-3000 Leuven Belgium
> Tel: +32-16-329750 Fax: +32-16-329760
> http://gloveg.kuleuven.ac.be/
>
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--
Frank E Harrell Jr Professor and Chair School of Medicine
Department of Biostatistics Vanderbilt University
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